RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
ATG4D-201ENST00000309469 MOGAT2Q3SYC2 334 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 TMEM255AQ5JRV8 349 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 OLFML2AQ68BL7 652 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 SFRP4Q6FHJ7 346 aaPredicted RBP18.54■□□□□ 0.56
ATG4D-201ENST00000309469 BTN2A1Q7KYR7 527 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 CPEB3Q8NE35 698 aaKnown RBP18.54■□□□□ 0.56
ATG4D-201ENST00000309469 OR2AE1Q8NHA4 323 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 CHST5Q9GZS9 411 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 PRDM14Q9GZV8 571 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 GP6Q9HCN6 339 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 TAS2R8Q9NYW2 309 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 ITGB1BP2Q9UKP3 347 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 MUC6Q6W4X9 2439 aa18.54■□□□□ 0.56
ATG4D-201ENST00000309469 ATP6V1G1O75348 118 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 AGTR1P30556 359 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 RRAS2P62070 204 aaPredicted RBP18.53■□□□□ 0.56
ATG4D-201ENST00000309469 CD83Q01151 205 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 UBE2V2Q15819 145 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 RAB12Q6IQ22 244 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 GLIPR1L1Q6UWM5 242 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 GPX8Q8TED1 209 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 FAM46BQ96A09 425 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 GPER1Q99527 375 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 BEX2Q9BXY8 128 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 CNOT1A5YKK6 2376 aaKnown RBP18.53■□□□□ 0.56
ATG4D-201ENST00000309469 DHRS7CA6NNS2 312 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 TMEM14DPA8MWL7 114 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 SULT1C2O00338 296 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 FCGR2AP12318 317 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 OR3A4PP47883 348 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 PCGF3Q3KNV8 242 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 ZNF101Q8IZC7 436 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 ACBD4Q8NC06 268 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 SEMA6DQ8NFY4 1073 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 AKAP1Q92667 903 aaKnown RBP eCLIP18.53■□□□□ 0.56
ATG4D-201ENST00000309469 FYTTD1Q96QD9 318 aaKnown RBP18.53■□□□□ 0.56
ATG4D-201ENST00000309469 PRSS50Q9UI38 385 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 ATPIF1Q9UII2 106 aa18.53■□□□□ 0.56
ATG4D-201ENST00000309469 RAB27BO00194 218 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 CSF1P09603 554 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 H2AFB2P0C5Z0 115 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 SSBP1Q04837 148 aaKnown RBP18.52■□□□□ 0.56
ATG4D-201ENST00000309469 OR2W3Q7Z3T1 314 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 DEDD2Q8WXF8 326 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 SEH1LQ96EE3 360 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 C12orf49Q9H741 205 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 SCPEP1Q9HB40 452 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 ZNF391Q9UJN7 358 aa18.52■□□□□ 0.56
ATG4D-201ENST00000309469 A0A0A6YYJ9 748 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 KLK10O43240 276 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 ACKR3P25106 362 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 RAG2P55895 527 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 KISS1Q15726 138 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 DMRTC1Q5HYR2 192 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 ZADH2Q8N4Q0 377 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 ZNF486Q96H40 463 aaPredicted RBP18.51■□□□□ 0.55
ATG4D-201ENST00000309469 C1orf147Q96MC9 270 aaPredicted RBP18.51■□□□□ 0.55
ATG4D-201ENST00000309469 RGCCQ9H4X1 137 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 MCUBQ9NWR8 336 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 ZNF407Q9C0G0 2248 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 WISP2O76076 250 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 HLA-HP01893 362 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 LPLP06858 475 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 PSMB1P20618 241 aaKnown RBP18.51■□□□□ 0.55
ATG4D-201ENST00000309469 RIPPLY1Q0D2K3 151 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 P4HA3Q7Z4N8 544 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 OR56B4Q8NH76 319 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 NPRL2Q8WTW4 380 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 RNF170Q96K19 258 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 ACTR6Q9GZN1 396 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 B3GNT2Q9NY97 397 aa18.51■□□□□ 0.55
ATG4D-201ENST00000309469 RIF1Q5UIP0 2472 aaKnown RBP18.5■□□□□ 0.55
ATG4D-201ENST00000309469 C7orf66A4D0T2 115 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 MEIS3P1A6NDR6 274 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 AQP7O14520 342 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 SCGNO76038 276 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 FAAP20Q6NZ36 180 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 CRIP3Q6Q6R5 217 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 TCTE3Q8IZS6 198 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 PNLDC1Q8NA58 520 aaKnown RBP18.5■□□□□ 0.55
ATG4D-201ENST00000309469 KCNG3Q8TAE7 436 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 GMPPAQ96IJ6 420 aaPredicted RBP18.5■□□□□ 0.55
ATG4D-201ENST00000309469 C1QTNF5Q9BXJ0 243 aa18.5■□□□□ 0.55
ATG4D-201ENST00000309469 ZMAT3Q9HA38 289 aaKnown RBP18.5■□□□□ 0.55
ATG4D-201ENST00000309469 WIPF3A6NGB9 483 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 UBBP0CG47 229 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 FAUP35544 74 aaKnown RBP18.49■□□□□ 0.55
ATG4D-201ENST00000309469 ZNF260Q3ZCT1 412 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 FBXW9Q5XUX1 488 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 AQP3Q92482 292 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 C20orf85Q9H1P6 137 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 ING3Q9NXR8 418 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 CLCF1Q9UBD9 225 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 ZNF503-AS2A6NEH8 195 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 COX5BP10606 129 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 CD79AP11912 226 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 GTF2F2P13984 249 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 MPGP29372 298 aa18.49■□□□□ 0.55
ATG4D-201ENST00000309469 ARR3P36575 388 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms