RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-201ENST00000309428 OR52A1Q9UKL2 312 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 TLCD2A6NGC4 264 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 BCAT2O15382 392 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-201ENST00000309428 IFNA17P01571 189 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 PNMTP11086 282 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 RPA2P15927 270 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 PGCP20142 388 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 ZNF93P35789 620 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-201ENST00000309428 BIDP55957 195 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 IKZF1Q13422 519 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 RAB32Q13637 225 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 BATFQ16520 125 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 HAGHQ16775 308 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 SULF2Q8IWU5 870 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 MITD1Q8WV92 249 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 MARVELD3Q96A59 401 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 GHRLQ9UBU3 117 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 HS3ST3A1Q9Y663 406 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 SLC17A2O00624 439 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 HPP00738 406 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 CLRN1P58418 232 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 NKX6-1P78426 367 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-201ENST00000309428 HSD11B2P80365 405 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 EFNB1P98172 346 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 MOGAT2Q3SYC2 334 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 MR1Q95460 341 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 SPSB2Q99619 263 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 TIMP4Q99727 224 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 ABHD6Q9BV23 337 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 TMEM59Q9BXS4 323 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 PLEKHJ1Q9NW61 149 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 PPP4R1LQ9P1A2 415 aa11.32□□□□□ -0.6
RETREG3-201ENST00000309428 APC2O95996 2303 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 UMAD1C9J7I0 102 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 TNFSF14O43557 240 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 EPHA1P21709 976 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 FZD5Q13467 585 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 GUSBP11Q6P575 273 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 FAM57BQ71RH2 274 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 SGPP2Q8IWX5 399 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 ZNF485Q8NCK3 441 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 WDR13Q9H1Z4 485 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 EXOSC3Q9NQT5 275 aaKnown RBP11.31□□□□□ -0.6
RETREG3-201ENST00000309428 IGKV1D-42A0A075B6H8 117 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 LOC101059948A0A1B0GTJ6 334 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 PATE3B3GLJ2 98 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 OR2T1O43869 369 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 TRAPPC6AO75865 159 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 SRSF3P84103 164 aaKnown RBP11.31□□□□□ -0.6
RETREG3-201ENST00000309428 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
RETREG3-201ENST00000309428 PLXDC1Q8IUK5 500 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 OR51F2Q8NH61 342 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 OR51E1Q8TCB6 317 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 PIGTQ969N2 578 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 MRPS28Q9Y2Q9 187 aaKnown RBP11.31□□□□□ -0.6
RETREG3-201ENST00000309428 TICRRQ7Z2Z1 1910 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 FAM230AA0A1W2PPH8 454 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 A8MXK9 166 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 NUDT21O43809 227 aaKnown RBP11.31□□□□□ -0.6
RETREG3-201ENST00000309428 TIAF1O95411 115 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 FCGR2CP31995 323 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 UBE2KP61086 200 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 MFGE8Q08431 387 aaPredicted RBP11.31□□□□□ -0.6
RETREG3-201ENST00000309428 PLXDC2Q6UX71 529 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 C9orf40Q8IXQ3 194 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 OR5D14Q8NGL3 314 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 SEH1LQ96EE3 360 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 C4orf45Q96LM5 186 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 CHST11Q9NPF2 352 aa11.31□□□□□ -0.6
RETREG3-201ENST00000309428 IGHV3-64DA0A0J9YX35 117 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 SCRG1O75711 98 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 EIF3GO75821 320 aaKnown RBP eCLIP11.3□□□□□ -0.6
RETREG3-201ENST00000309428 OR2J2O76002 312 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 GLRA1P23415 457 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 HSD17B7P56937 341 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 SLC37A1P57057 533 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 EGR4Q05215 589 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 SLC17A1Q14916 467 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 C1orf140Q5VVS0 124 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 RAET1LQ5VY80 246 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 TFAP2EQ6VUC0 442 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 TMPPEQ6ZT21 453 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 MISPQ8IVT2 679 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 CA5BP1Q8WTZ4 195 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 CYYR1Q96J86 154 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 SUCNR1Q9BXA5 334 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 TMPRSS13Q9BYE2 586 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 PCOLCE2Q9UKZ9 415 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 ACACAQ13085 2346 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 PNPP00491 289 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 PTAFRP25105 342 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 CD27P26842 260 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 HERV-K104P61576 105 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 GNMTQ14749 295 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 TMEM244Q5VVB8 128 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
RETREG3-201ENST00000309428 TMEM156Q8N614 296 aa11.3□□□□□ -0.6
RETREG3-201ENST00000309428 SGK3Q96BR1 496 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms