RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 NICN1Q9BSH3 213 aa8.4□□□□□ -1.06
XCR1-201ENST00000309285 FAM103A1Q9BTL3 118 aaKnown RBP8.4□□□□□ -1.06
XCR1-201ENST00000309285 C19orf53Q9UNZ5 99 aaPredicted RBP8.4□□□□□ -1.06
XCR1-201ENST00000309285 V9GYH0 126 aa8.4□□□□□ -1.06
XCR1-201ENST00000309285 RIF1Q5UIP0 2472 aaKnown RBP8.4□□□□□ -1.07
XCR1-201ENST00000309285 WNT1P04628 370 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 ICAM2P13598 275 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 DPP4P27487 766 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 NPY4RP50391 375 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 RAB38P57729 211 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 RPS18P62269 152 aaKnown RBP8.4□□□□□ -1.07
XCR1-201ENST00000309285 MEP1BQ16820 701 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 TMEM244Q5VVB8 128 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 VWA1Q6PCB0 445 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 SEZ6L2Q6UXD5 910 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 KIRREL1Q96J84 757 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 OR2A5Q96R48 311 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 OR51M1Q9H341 326 aa8.4□□□□□ -1.07
XCR1-201ENST00000309285 MKI67P46013 3256 aaKnown RBP8.4□□□□□ -1.07
XCR1-201ENST00000309285 TRAV34A0A0B4J273 112 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 CST2P09228 141 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 OR4E1P0C645 316 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 OR5H8P0DN80 308 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 PJVKQ0ZLH3 352 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 SLC25A35Q3KQZ1 300 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 ABLIM2Q6H8Q1 611 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 TOMM20LQ6UXN7 152 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 MBOAT2Q6ZWT7 520 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 ZNF687Q8N1G0 1237 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 OR4D11Q8NGI4 311 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 CHST8Q9H2A9 424 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 UBQLN3Q9H347 655 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 LHX9Q9NQ69 397 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 CRYBA2P53672 197 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 LSM11P83369 360 aaKnown RBP eCLIP8.39□□□□□ -1.07
XCR1-201ENST00000309285 RPUSD3Q6P087 351 aaKnown RBP8.39□□□□□ -1.07
XCR1-201ENST00000309285 GLDNQ6ZMI3 551 aaPredicted RBP8.39□□□□□ -1.07
XCR1-201ENST00000309285 Q6ZTK2 550 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 OR2G3Q8NGZ4 309 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 NUBPLQ8TB37 319 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 TRMT61AQ96FX7 289 aaKnown RBP8.39□□□□□ -1.07
XCR1-201ENST00000309285 TNFRSF13CQ96RJ3 184 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 LYRM4Q9HD34 91 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 V9GYS6 101 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 LAMA2P24043 3122 aaKnown RBP8.39□□□□□ -1.07
XCR1-201ENST00000309285 DOCK9Q9BZ29 2069 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 TMEM265A0A087WTH1 108 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 IGHV3-64DA0A0J9YX35 117 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 LOC102723971A0A1B0GUV8 181 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 CEBPZOSA8MTT3 80 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 SOX15O60248 233 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 EIF3GO75821 320 aaKnown RBP eCLIP8.39□□□□□ -1.07
XCR1-201ENST00000309285 H2AFB1P0C5Y9 115 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 ERGP11308 486 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 NID1P14543 1247 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 CRYBB2P43320 205 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 TPBGQ13641 420 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 CRMP1Q14194 572 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 ZIC1Q15915 447 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 LRP11Q86VZ4 500 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 SFTPA2Q8IWL1 248 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 LFNGQ8NES3 379 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 MIB2Q96AX9 1013 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 TWSG1Q9GZX9 223 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 SLC35D1Q9NTN3 355 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 GPR55Q9Y2T6 319 aaPredicted RBP8.39□□□□□ -1.07
XCR1-201ENST00000309285 MRPS2Q9Y399 296 aaKnown RBP8.39□□□□□ -1.07
XCR1-201ENST00000309285 ZNF337Q9Y3M9 751 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 ARRDC5A6NEK1 342 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 RFPL4AA6NLU0 287 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 RFPL4AL1F8VTS6 287 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 SLC35E2P0CK97 266 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 PTHLHP12272 177 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 GABRA1P14867 456 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 INSL4Q14641 139 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 ZNF74Q16587 644 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 MED25Q71SY5 747 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 SIRT6Q8N6T7 355 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 MBD3L1Q8WWY6 194 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 TSSK2Q96PF2 358 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 PLA2G12AQ9BZM1 189 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 SELENOIQ9C0D9 397 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 CYSLTR2Q9NS75 346 aa8.39□□□□□ -1.07
XCR1-201ENST00000309285 SPTY2D1-AS1A0A0U1RR47 76 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 LOC102725191A0A1B0GVB3 256 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 SLC22A20A6NK97 555 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 K7ERU9 68 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 MSTNO14793 375 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 LRP3O75074 770 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 IGF2P01344 180 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 CD3DP04234 171 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 CELA2BP08218 269 aaPredicted RBP8.38□□□□□ -1.07
XCR1-201ENST00000309285 SSR4P51571 173 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 CARD18P57730 90 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 PPP1CAP62136 330 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 SKP2Q13309 424 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 MOGAT2Q3SYC2 334 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 Q499Y3 187 aa8.38□□□□□ -1.07
XCR1-201ENST00000309285 ZNF595Q8IYB9 648 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms