RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 IGHA1P01876 353 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 HLA-DPB1P04440 258 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 HEXAP06865 529 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 HTR1AP08908 422 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 IRF2P14316 349 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MYL12AP19105 171 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 USF1P22415 310 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CA6P23280 308 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 COL8A2P25067 703 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GIFP27352 417 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MAP2K3P46734 347 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMEM33P57088 247 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ISL1P61371 349 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GALEQ14376 348 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 OR8B8Q15620 311 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SMN1Q16637 294 aaKnown RBP9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CDONQ4KMG0 1287 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 C6orf52Q5T4I8 152 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LIPNQ5VXI9 398 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 IZUMO2Q6UXV1 221 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 THAP5Q7Z6K1 395 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 KLBQ86Z14 1044 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CIARTQ8N365 385 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SPERTQ8NA61 448 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 OR52I1Q8NGK6 324 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 OR51E1Q8TCB6 317 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TFAP2CQ92754 450 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 YIPF5Q969M3 257 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ITFG2Q969R8 447 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 FAM71F1Q96KD3 344 aaPredicted RBP9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MEGF10Q96KG7 1140 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 C4orf36Q96KX1 117 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SIGLEC11Q96RL6 698 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PLEKHA1Q9HB21 404 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ACOXLQ9NUZ1 547 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 C14orf119Q9NWQ9 140 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CHCHD3Q9NX63 227 aaKnown RBP9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TREM2Q9NZC2 230 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF319Q9P2F9 582 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PPP1R3CQ9UQK1 317 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF816-ZNF321PA0A0X1KG74 233 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 A0A1B0GVI7 797 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LRRC30A6NM36 301 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 VWC2LB2RUY7 222 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 J3QLW9 94 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 J3QRE1 110 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SRSF10O75494 262 aaKnown RBP9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 DHRS3O75911 302 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PNPP00491 289 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TTRP02766 147 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GNAO1P09471 354 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 UBCP0CG48 685 aaKnown RBP9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ATP6V1B1P15313 513 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF19P17023 458 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 DCKP27707 260 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 VHLP40337 213 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CD200P41217 278 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CHN2P52757 468 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LOXL1Q08397 574 aaPredicted RBP9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MRPL28Q13084 256 aaKnown RBP9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RIN1Q13671 783 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ODF4Q2M2E3 257 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 DOK3Q7L591 496 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 BIVMQ86UB2 503 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LHFPL3Q86UP9 236 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ELMOD2Q8IZ81 293 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 C1orf87Q8N0U7 546 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CELF2-AS1Q8N7Q2 184 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MAPK1IP1LQ8NDC0 245 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 SEMA6DQ8NFY4 1073 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 OR11L1Q8NGX0 322 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 HAVCR2Q8TDQ0 301 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 HPS1Q92902 700 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RAB1CQ92928 201 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 DVL3Q92997 716 aaPredicted RBP9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LYZL4Q96KX0 146 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 HIST1H2AAQ96QV6 131 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 G6PC2Q9NQR9 355 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GPR84Q9NQS5 396 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MRPS18AQ9NVS2 196 aaKnown RBP9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ERVK13-1Q9NX77 482 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MYRFQ9Y2G1 1151 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 EXOSC1Q9Y3B2 195 aaKnown RBP9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MAST4O15021 2626 aa9.32□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TEX15Q9BXT5 2789 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ISPDA4D126 451 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 EFCAB10A6NFE3 127 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 A6NLC8 198 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 P2RY10O00398 339 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RP2O75695 350 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PSMB10P40306 273 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GBX2P52951 348 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 OR12D2P58182 307 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RIPPLY1Q0D2K3 151 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 PRDX4Q13162 271 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 WDR38Q5JTN6 314 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 ZNF684Q5T5D7 378 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 TMPRSS11AQ6ZMR5 421 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 KCTD8Q6ZWB6 473 aa9.31□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 CATSPERDQ86XM0 798 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms