RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 DHRS11Q6UWP2 260 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 MRGPREQ86SM8 312 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 JSRP1Q96MG2 331 aaPredicted RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 IP6K3Q96PC2 410 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 TRIM2Q9C040 744 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 PARPBPQ9NWS1 579 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 NXT1Q9UKK6 140 aaKnown RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 B3GALT1Q9Y5Z6 326 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 PRAMEF27A3QJZ7 478 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 SEC14L6B5MCN3 397 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 TNFSF15O95150 251 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 ERCC1P07992 297 aaPredicted RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 ZNF25P17030 456 aaPredicted RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 TOMM20Q15388 145 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 OR8G1Q15617 311 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 ZNF813Q6ZN06 617 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 ZNF511Q8NB15 262 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 NMNAT3Q96T66 252 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 VN1R1Q9GZP7 353 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 C20orf141Q9NUB4 165 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 CES1P1Q9UKY3 287 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 COL4A2P08572 1712 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 CEP192Q8TEP8 1941 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 OGG1O15527 345 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 NDUFB2O95178 105 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 PLGP00747 810 aaPredicted RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 TAGLN2P37802 199 aaKnown RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 OR3A2P47893 321 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 MLC1Q15049 377 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 PYY3Q5JQD4 70 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 TMEM244Q5VVB8 128 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 C6orf15Q6UXA7 325 aaPredicted RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 ADOQ96SZ5 270 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 KCNK15Q9H427 330 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 SEBOXQ9HB31 216 aaPredicted RBP9.76□□□□□ -0.85
LSM3-201ENST00000306024 AMDHD2Q9Y303 409 aa9.76□□□□□ -0.85
LSM3-201ENST00000306024 BORCS7-ASMTA0A0B4J1R7 106 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 FOLR2P14207 255 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 GNALP38405 381 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 FBXW4P57775 412 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 ZNF239Q16600 458 aaKnown RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 LEG1Q6P5S2 330 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 LANCL3Q6ZV70 420 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 PLPP7Q8NBV4 271 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 SEMA6DQ8NFY4 1073 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 OR4S1Q8NGB4 309 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 ANKRD9Q96BM1 317 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 SAT2Q96F10 170 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 SLC35A4Q96G79 324 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 ZNF764Q96H86 408 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 ZNF681Q96N22 645 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 DUSP22Q9NRW4 184 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 FAM212BQ9NTI7 297 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 LUZP4Q9P127 313 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 COL6A3P12111 3177 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 TRBV11-1A0A0K0K1C0 115 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 ZNF354AO60765 605 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 CSTAP01040 98 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 RCC1P18754 421 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 ACKR3P25106 362 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 ISXQ2M1V0 245 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 LIPNQ5VXI9 398 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 PEAR1Q5VY43 1037 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 ZNF836Q6ZNA1 936 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 FAM219AQ8IW50 185 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 OR5L2Q8NGL0 311 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 TAAR9Q96RI9 348 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 LSM5Q9Y4Y9 91 aaKnown RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 C10orf142B7Z368 130 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 SOX15O60248 233 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 EIF4E2O60573 245 aaKnown RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 CT62P0C5K7 136 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 TUBG1P23258 451 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 GUK1Q16774 197 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 FAM69BQ5VUD6 431 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 DMRTC2Q8IXT2 367 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 C16orf52Q8NHV5 167 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 GPR61Q9BZJ8 451 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 CHRNA10Q9GZZ6 450 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.75□□□□□ -0.85
LSM3-201ENST00000306024 DOK5Q9P104 306 aa9.75□□□□□ -0.85
LSM3-201ENST00000306024 CTAG2O75638 210 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 TIAF1O95411 115 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 DBIP07108 87 aaKnown RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 SFTPCP11686 197 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 CD59P13987 128 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 HIST1H1CP16403 213 aaKnown RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 ACP1P24666 158 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 RAB1AP62820 205 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 C2orf76Q3KRA6 126 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 GXYLT1Q4G148 440 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 MRPL2Q5T653 305 aaKnown RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 RPL7L1Q6DKI1 246 aaKnown RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 RNF113BQ8IZP6 322 aaKnown RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 ZNF619Q8N2I2 560 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 PNLDC1Q8NA58 520 aaKnown RBP9.74□□□□□ -0.85
LSM3-201ENST00000306024 SLC30A7Q8NEW0 376 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 OR9K2Q8NGE7 335 aa9.74□□□□□ -0.85
LSM3-201ENST00000306024 ATG101Q9BSB4 218 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms