RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 MT-ND2P03891 347 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 UBCP0CG48 685 aaKnown RBP20.87■□□□□ 0.93
HOXC9-201ENST00000303450 PAX1P15863 534 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 PTH2RP49190 550 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 GTF2A1P52655 376 aaPredicted RBP20.87■□□□□ 0.93
HOXC9-201ENST00000303450 ATP5J2P56134 94 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 OR8B8Q15620 311 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 CCDC58Q4VC31 144 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 OR13G1Q8NGZ3 307 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 SORCS2Q96PQ0 1159 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 GSX2Q9BZM3 304 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 TRIM36Q9NQ86 728 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 TMEM100Q9NV29 134 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 ZDHHC8Q9ULC8 765 aa20.87■□□□□ 0.93
HOXC9-201ENST00000303450 CSMD1Q96PZ7 3565 aa20.86■□□□□ 0.93
HOXC9-201ENST00000303450 MAP2K3P46734 347 aa20.86■□□□□ 0.93
HOXC9-201ENST00000303450 RPL22L1Q6P5R6 122 aaKnown RBP20.86■□□□□ 0.93
HOXC9-201ENST00000303450 Q6ZR03 302 aa20.86■□□□□ 0.93
HOXC9-201ENST00000303450 FTMTQ8N4E7 242 aa20.86■□□□□ 0.93
HOXC9-201ENST00000303450 ZNF485Q8NCK3 441 aa20.86■□□□□ 0.93
HOXC9-201ENST00000303450 CSNK2A3Q8NEV1 391 aa20.86■□□□□ 0.93
HOXC9-201ENST00000303450 SLC30A2Q9BRI3 323 aa20.86■□□□□ 0.93
HOXC9-201ENST00000303450 MRPL15Q9P015 296 aaKnown RBP20.86■□□□□ 0.93
HOXC9-201ENST00000303450 TRBV2A0A0J9YWF9 115 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 A0A1B0GTI1 187 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 A0A1B0GVI7 797 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 ANKRD30BLA7E2S9 258 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 DHRS3O75911 302 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 ATP6V1B1P15313 513 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 TNK1Q13470 666 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 IRF3Q14653 427 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 PCGF3Q3KNV8 242 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 TMEM244Q5VVB8 128 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 DOK3Q7L591 496 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 RDH10Q8IZV5 341 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 ZNF676Q8N7Q3 588 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 OR2Z1Q8NG97 314 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 ITFG2Q969R8 447 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 DIRC2Q96SL1 478 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 LRCH1Q9Y2L9 728 aa20.85■□□□□ 0.93
HOXC9-201ENST00000303450 LOC390937A0A1W2PQ73 354 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 OR4C45A6NMZ5 311 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 SYT7O43581 403 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 NDUFS7O75251 213 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 IGHV1-46P01743 117 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 ACKR3P25106 362 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 TSTQ16762 297 aaKnown RBP20.84■□□□□ 0.93
HOXC9-201ENST00000303450 XAF1Q6GPH4 301 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 SEMA6DQ8NFY4 1073 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 NEU4Q8WWR8 484 aaPredicted RBP20.84■□□□□ 0.93
HOXC9-201ENST00000303450 ELMOD3Q96FG2 381 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 SLC22A4Q9H015 551 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 COMMD4Q9H0A8 199 aa20.84■□□□□ 0.93
HOXC9-201ENST00000303450 LOC107986453A0A1B0GWG9 222 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 TMEM212A6NML5 194 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 H3BSH0 61 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 TPD52L2O43399 206 aaKnown RBP20.83■□□□□ 0.93
HOXC9-201ENST00000303450 LALBAP00709 142 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 CCL1P22362 96 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 CA6P23280 308 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 TNFSF4P23510 183 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 EFNA4P52798 201 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 TAS2R43P59537 309 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 RIPPLY1Q0D2K3 151 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 LRRC75A-AS1Q8N1F1 130 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 PLPP7Q8NBV4 271 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 OR5AK2Q8NH90 309 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 BARX1Q9HBU1 254 aaPredicted RBP20.83■□□□□ 0.93
HOXC9-201ENST00000303450 DECR2Q9NUI1 292 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 NKIRAS2Q9NYR9 191 aa20.83■□□□□ 0.93
HOXC9-201ENST00000303450 CCDC168Q8NDH2 2452 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 MRPS14O60783 128 aaKnown RBP20.83■□□□□ 0.92
HOXC9-201ENST00000303450 ZFPL1O95159 310 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 F12P00748 615 aaPredicted RBP20.83■□□□□ 0.92
HOXC9-201ENST00000303450 IGHV4-39P01824 125 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 HLA-DPB1P04440 258 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 ISG15P05161 165 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 ADH4P08319 380 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 MAGEB1P43366 347 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 CCL8P80075 99 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 CDK5R1Q15078 307 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 MED22Q15528 200 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 FAM209AQ5JX71 171 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 OR10AD1Q8NGE0 317 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 PAPOLGQ9BWT3 736 aaKnown RBP20.83■□□□□ 0.92
HOXC9-201ENST00000303450 PIGLQ9Y2B2 252 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 NOP16Q9Y3C1 178 aaKnown RBP20.83■□□□□ 0.92
HOXC9-201ENST00000303450 RHBDD3Q9Y3P4 386 aa20.83■□□□□ 0.92
HOXC9-201ENST00000303450 CYSRT1A8MQ03 144 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 GNALP38405 381 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 SPHARQ15513 63 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 OR8G1Q15617 311 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 CCDC54Q8NEL0 328 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 OR14K1Q8NGZ2 314 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 OR5M11Q96RB7 305 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 PDCD1LG2Q9BQ51 273 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 EGLN1Q9GZT9 426 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 V9GYS6 101 aa20.82■□□□□ 0.92
HOXC9-201ENST00000303450 ZNF816-ZNF321PA0A0X1KG74 233 aa20.81■□□□□ 0.92
HOXC9-201ENST00000303450 H0YL77 283 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms