RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 RIPPLY1Q0D2K3 151 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 FAM209AQ5JX71 171 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 SLC25A28Q96A46 364 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 DACT3Q96B18 629 aaPredicted RBP12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 SGK3Q96BR1 496 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 C7orf50Q9BRJ6 194 aaKnown RBP12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 LOC390937A0A1W2PQ73 354 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 BPNT1O95861 308 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 GSTT2P0CG29 244 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 ANOS1P23352 680 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 RAB25P57735 213 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 RAB1AP62820 205 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 AGAP6Q5VW22 663 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 ZNF585AQ6P3V2 769 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 ZC3HAV1LQ96H79 300 aaKnown RBP12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 KLK11Q9UBX7 282 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 PRRC2CQ9Y520 2896 aaKnown RBP12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 MT-ND4P03905 459 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 MPGP29372 298 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 TGFBR3Q03167 851 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 GLIPR1L1Q6UWM5 242 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 ACBD4Q8NC06 268 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 AKAP1Q92667 903 aaKnown RBP eCLIP12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 CACNG6Q9BXT2 260 aa12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 TNRC6AQ8NDV7 1962 aaKnown RBP12.66□□□□□ -0.38
SHCBP1-201ENST00000303383 CIB4A0PJX0 185 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 MMP7P09237 267 aaPredicted RBP12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 FIP1L1Q6UN15 594 aaKnown RBP12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 DUSP18Q8NEJ0 188 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 ZNF391Q9UJN7 358 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 C5orf49A4QMS7 147 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 C6orf183Q5T699 404 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 IGFL3Q6UXB1 125 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 LINC00469Q8N7U9 141 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 OR5D18Q8NGL1 313 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 C10orf35Q96D05 121 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 RGCCQ9H4X1 137 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 LUZP4Q9P127 313 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 V9GYS6 101 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 XRCC2O43543 280 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 GIFP27352 417 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 FAUP35544 74 aaKnown RBP12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 DYRK1AQ13627 763 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 RAB12Q6IQ22 244 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 OR5AS1Q8N127 324 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 PIGTQ969N2 578 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 ING4Q9UNL4 249 aa12.65□□□□□ -0.38
SHCBP1-201ENST00000303383 TRAV6A0A075B6T7 132 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CCNKO75909 580 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 DHFRP00374 187 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 GABRA1P14867 456 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 APLNRP35414 380 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 PCGF3Q3KNV8 242 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CHST5Q9GZS9 411 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 GPR173Q9NS66 373 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 MEIS3P1A6NDR6 274 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 MPIG6BO95866 241 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 RAB6AP20340 208 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 STOMP27105 288 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 SLC6A1P30531 599 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 OR3A2P47893 321 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 PRSS12P56730 875 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 UBE2NP61088 152 aaKnown RBP12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 MALLQ13021 153 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CPEB3Q8NE35 698 aaKnown RBP12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CPNE2Q96FN4 548 aaPredicted RBP12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 TAAR6Q96RI8 345 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 DCAF16Q9NXF7 216 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 COPZ2Q9P299 210 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 FCER2P06734 321 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CCL2P13500 99 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 RCVRNP35243 200 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 EIF2S3P41091 472 aaKnown RBP12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 OR3A4PP47883 348 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 EIF2B2P49770 351 aaKnown RBP12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 HGFACQ04756 655 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CNN3Q15417 329 aaKnown RBP12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 SF3B4Q15427 424 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■■■ 27.3
SHCBP1-201ENST00000303383 KISS1Q15726 138 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 TATDN3Q17R31 274 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 SLC22A6Q4U2R8 563 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 HIKESHIQ53FT3 197 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 ZNF529Q6P280 563 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 FAM214BQ7L5A3 538 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CDH26Q8IXH8 852 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 KCNG3Q8TAE7 436 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 PTX4Q96A99 478 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CREB3L1Q96BA8 519 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 ZMAT3Q9HA38 289 aaKnown RBP12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 NUDT15Q9NV35 164 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 NKIRAS2Q9NYR9 191 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 TAS2R8Q9NYW2 309 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 CLCF1Q9UBD9 225 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 ATPIF1Q9UII2 106 aa12.64□□□□□ -0.39
SHCBP1-201ENST00000303383 MED12LQ86YW9 2145 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 A0A0A6YYH2 397 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 A6NJ64 397 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 FAM25EA8MYX2 175 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 RRP8O43159 456 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms