RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 LINC01590Q5TEZ4 76 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 OR1S2Q8NGQ3 325 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 ASB5Q8WWX0 329 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 SEH1LQ96EE3 360 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 NDRG3Q9UGV2 375 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 BCAT2O15382 392 aaPredicted RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 ZNF354AO60765 605 aaPredicted RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 PET100P0DJ07 73 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 CX3CR1P49238 355 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 SLC25A1P53007 311 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 ZNF121P58317 390 aaPredicted RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 CYCSP99999 105 aaKnown RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 INSM1Q01101 510 aaPredicted RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 CDC20BQ86Y33 519 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 SVBPQ8N300 66 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 KCNRGQ8N5I3 272 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 BHLHE23Q8NDY6 225 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 BORCS8Q96FH0 119 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 LIN37Q96GY3 246 aaPredicted RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 ZNF649Q9BS31 505 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.55□□□□□ -0.4
SDC2-201ENST00000302190 GPR173Q9NS66 373 aa12.55□□□□□ -0.4
SDC2-201ENST00000302190 UBE2J1Q9Y385 318 aaPredicted RBP12.55□□□□□ -0.4
SDC2-201ENST00000302190 DMXL1Q9Y485 3027 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 DNASE2O00115 360 aaPredicted RBP12.54□□□□□ -0.4
SDC2-201ENST00000302190 XRCC2O43543 280 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 ZFAND5O76080 213 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 ZNF84P51523 738 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 RNF4P78317 190 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 ACY1Q03154 408 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 EMC4Q5J8M3 183 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 OGFOD3Q6PK18 319 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 C5orf46Q6UWT4 87 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 ACOT7LQ6ZUV0 252 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 OR2W3Q7Z3T1 314 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 MCEMP1Q8IX19 187 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 BPIFCQ8NFQ6 507 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 KCNG3Q8TAE7 436 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 RNF128Q8TEB7 428 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 CMSS1Q9BQ75 279 aaKnown RBP12.54□□□□□ -0.4
SDC2-201ENST00000302190 C19orf25Q9UFG5 118 aaPredicted RBP12.54□□□□□ -0.4
SDC2-201ENST00000302190 ICAM5Q9UMF0 924 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 K7EPK0 472 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 IL5P05113 134 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 SMIM10L1P0DMW3 83 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 KCNJ3P48549 501 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 SSTP61278 116 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 FAM71E2Q8N5Q1 922 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 SMIM10Q96HG1 83 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 HIST1H2AAQ96QV6 131 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 NICN1Q9BSH3 213 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
SDC2-201ENST00000302190 MMACHCQ9Y4U1 282 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 SPTAN1Q13813 2472 aaKnown RBP12.54□□□□□ -0.4
SDC2-201ENST00000302190 H3BMH7 237 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 ADAM10O14672 748 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 GSTZ1O43708 216 aaPredicted RBP12.54□□□□□ -0.4
SDC2-201ENST00000302190 EIF4E2O60573 245 aaKnown RBP12.54□□□□□ -0.4
SDC2-201ENST00000302190 RAD51DO75771 328 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 SNAPC5O75971 98 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 IGHV4-34P06331 123 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 PATE4P0C8F1 98 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 SLC43A2Q8N370 569 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 OR6S1Q8NH40 331 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 SFT2D1Q8WV19 159 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 OR10A2Q9H208 303 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 CHST11Q9NPF2 352 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 COA4Q9NYJ1 87 aa12.54□□□□□ -0.4
SDC2-201ENST00000302190 FRG2CA6NGY1 282 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 C11orf87Q6NUJ2 197 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 OR10G3Q8NGC4 313 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 IL1F10Q8WWZ1 152 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 CTHRC1Q96CG8 243 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 ARHGAP5-AS1Q96IT6 56 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 LRFN5Q96NI6 719 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 GSN-AS1Q9NRJ2 163 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 PURGQ9UJV8 347 aaKnown RBP12.53□□□□□ -0.4
SDC2-201ENST00000302190 RFPL4AA6NLU0 287 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 RFPL4AL1F8VTS6 287 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 CNOT4O95628 575 aaKnown RBP12.53□□□□□ -0.4
SDC2-201ENST00000302190 GLRA1P23415 457 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 CD27P26842 260 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 RFC3P40938 356 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 EGR4Q05215 589 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 MYBPHQ13203 477 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 RGS7BPQ6MZT1 257 aaPredicted RBP12.53□□□□□ -0.4
SDC2-201ENST00000302190 TMEM217Q8N7C4 229 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 OR5L1Q8NGL2 311 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 PNPLA2Q96AD5 504 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 GNRHR2Q96P88 292 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 SULT4A1Q9BR01 284 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 PIGLQ9Y2B2 252 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 OR3A4PP47883 348 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 LIMK1P53667 647 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 ELFN2Q5R3F8 820 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 AVPI1Q5T686 147 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 GPR137CQ8N3F9 429 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 ADAD2Q8NCV1 583 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms