RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 DISC1C4P0D8 188 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 LINC01387J3KSC0 135 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 SYT7O43581 403 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 ABOP16442 354 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 RFC3P40938 356 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 FAM166AQ6J272 317 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 TMEM17Q86X19 198 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 OR5T2Q8NGG2 359 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 OR52N4Q8NGI2 321 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 OR6N1Q8NGY5 312 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 OR6X1Q8NH79 312 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 TSNAXQ99598 290 aaKnown RBP19.36■□□□□ 0.69
TPM4-201ENST00000300933 IFT22Q9H7X7 185 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 BARX1Q9HBU1 254 aaPredicted RBP19.36■□□□□ 0.69
TPM4-201ENST00000300933 KLF2Q9Y5W3 355 aaPredicted RBP19.36■□□□□ 0.69
TPM4-201ENST00000300933 MED13Q9UHV7 2174 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 H7C417 338 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 CD3DP04234 171 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 JMJD7P0C870 316 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 MMP16P51512 607 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 SLC35A1P78382 337 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 SLC25A47Q6Q0C1 308 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 OR13C9Q8NGT0 318 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 CYYR1Q96J86 154 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 MRI1Q9BV20 369 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 POFUT1Q9H488 388 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 MTFP1Q9UDX5 166 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 MYO7BQ6PIF6 2116 aa19.36■□□□□ 0.69
TPM4-201ENST00000300933 DMXL1Q9Y485 3027 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 A0A1B0GW55 424 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 DUX4L2P0CJ85 424 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 DUX4L3P0CJ86 424 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 DUX4L4P0CJ87 422 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 DUX4L5P0CJ88 424 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 DUX4L6P0CJ89 424 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 DUX4L7P0CJ90 424 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 NAT2P11245 290 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 CNR1P21554 472 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 C6orf15Q6UXA7 325 aaPredicted RBP19.35■□□□□ 0.69
TPM4-201ENST00000300933 ZNF704Q6ZNC4 412 aaPredicted RBP19.35■□□□□ 0.69
TPM4-201ENST00000300933 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.35■□□□□ 0.69
TPM4-201ENST00000300933 OR1J2Q8NGS2 313 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 SLC25A43Q8WUT9 341 aaPredicted RBP19.35■□□□□ 0.69
TPM4-201ENST00000300933 CMBLQ96DG6 245 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 FOXJ2Q9P0K8 574 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 DUX4Q9UBX2 424 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 ZFHX4Q86UP3 3567 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 RFPL4AA6NLU0 287 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 E9PLN8 166 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 RFPL4AL1F8VTS6 287 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 MGMTP16455 207 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 ADH6P28332 368 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 DSCR4P56555 118 aaPredicted RBP19.35■□□□□ 0.69
TPM4-201ENST00000300933 GABREP78334 506 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 RTN4RL2Q86UN3 420 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 CBLN2Q8IUK8 224 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 ACBD4Q8NC06 268 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 FAM71F1Q96KD3 344 aaPredicted RBP19.35■□□□□ 0.69
TPM4-201ENST00000300933 SRXN1Q9BYN0 137 aa19.35■□□□□ 0.69
TPM4-201ENST00000300933 PCSK5Q92824 1860 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 TRAPPC6AO75865 159 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 ZNF121P58317 390 aaPredicted RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 TMEM244Q5VVB8 128 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 PLXDC2Q6UX71 529 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 BEST3Q8N1M1 668 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 RBM24Q9BX46 236 aaKnown RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 ZNF471Q9BX82 626 aaPredicted RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 ESRP2Q9H6T0 727 aaKnown RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 CNTD2Q9H8S5 307 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 SH2D2AQ9NP31 389 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 UBBP0CG47 229 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 UBCP0CG48 685 aaKnown RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 RPS27AP62979 156 aaKnown RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 UBA52P62987 128 aaKnown RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 HAGHLQ6PII5 290 aaPredicted RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 ABHD12BQ7Z5M8 362 aaPredicted RBP19.34■□□□□ 0.69
TPM4-201ENST00000300933 SLC5A6Q9Y289 635 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 PCNX2A6NKB5 2137 aa19.34■□□□□ 0.69
TPM4-201ENST00000300933 ISG15P05161 165 aa19.33■□□□□ 0.69
TPM4-201ENST00000300933 GP1BAP07359 652 aa19.33■□□□□ 0.69
TPM4-201ENST00000300933 H3F3AP84243 136 aa19.33■□□□□ 0.69
TPM4-201ENST00000300933 PUSL1Q8N0Z8 303 aaKnown RBP19.33■□□□□ 0.69
TPM4-201ENST00000300933 P4HTMQ9NXG6 502 aa19.33■□□□□ 0.69
TPM4-201ENST00000300933 FBXO4Q9UKT5 387 aa19.33■□□□□ 0.69
TPM4-201ENST00000300933 DNAJC13O75165 2243 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 C9orf172C9J069 976 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 ATG12O94817 140 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 HOXA1P49639 335 aaPredicted RBP19.33■□□□□ 0.68
TPM4-201ENST00000300933 GUCA2BQ16661 112 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 LY6G6FQ5SQ64 297 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 SPINK14Q6IE38 97 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 DEGS2Q6QHC5 323 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 FAM57BQ71RH2 274 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 OR14L1PQ8NHC6 308 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 SEC22AQ96IW7 307 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 DEPPQ9NTK1 212 aa19.33■□□□□ 0.68
TPM4-201ENST00000300933 FARSAQ9Y285 508 aaKnown RBP19.33■□□□□ 0.68
TPM4-201ENST00000300933 KANTRA0A1W2PQU2 76 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 B4E171 279 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 NPIPA2E9PIF3 369 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms