RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TOX3O15405 576 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-201ENST00000299333 MBTPS2O43462 519 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 COX7A2P2O60397 106 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 NUDT3O95989 172 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 CD46P15529 392 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 CD200P41217 278 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 PLPP6Q8IY26 295 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 PDXPQ96GD0 296 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 ZDHHC5Q9C0B5 715 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 SLC35B3Q9H1N7 401 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 A0A1B0GV90 55 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 FZD6O60353 706 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 HOXD9P28356 352 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-201ENST00000299333 HAAOP46952 286 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 LIM2P55344 173 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 LPAL2Q16609 132 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 RHOVQ96L33 236 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 CITED2Q99967 270 aaPredicted RBP13.46□□□□□ -0.25
SCN3B-201ENST00000299333 GPR87Q9BY21 358 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 WNT1P04628 370 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 OR52N4Q8NGI2 321 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 RHBDD1Q8TEB9 315 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 TRAPPC4Q9Y296 219 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 WASHC3Q9Y3C0 194 aa13.46□□□□□ -0.25
SCN3B-201ENST00000299333 RGS13O14921 159 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 PLRG1O43660 514 aaKnown RBP13.46□□□□□ -0.26
SCN3B-201ENST00000299333 EIF1P41567 113 aaKnown RBP13.46□□□□□ -0.26
SCN3B-201ENST00000299333 EGR3Q06889 387 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 TMEM241Q24JQ0 296 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 FAHD1Q6P587 224 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 SLC46A2Q9BY10 475 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 LEUTXA8MZ59 168 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 PTHLHP12272 177 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 PAX5Q02548 391 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF385BQ569K4 471 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 DMRTC1Q5HYR2 192 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 LAIR1Q6GTX8 287 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 ANKRD16Q6P6B7 361 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 LHFPL2Q6ZUX7 228 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 TAS1R1Q7RTX1 841 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 PRRX2Q99811 253 aa13.46□□□□□ -0.26
SCN3B-201ENST00000299333 MRPL13Q9BYD1 178 aaKnown RBP13.46□□□□□ -0.26
SCN3B-201ENST00000299333 H3BNC9 293 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 ERVS71-1P61550 626 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 TSEN54Q7Z6J9 526 aaKnown RBP13.45□□□□□ -0.26
SCN3B-201ENST00000299333 ETFBKMTQ8IXQ9 262 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 TMEM174Q8WUU8 243 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 SDF2Q99470 211 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 SLC25A19Q9HC21 320 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 TIMM9Q9Y5J7 89 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 GPR37O15354 613 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 CHRNA7P36544 502 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 RPS16P62249 146 aaKnown RBP13.45□□□□□ -0.26
SCN3B-201ENST00000299333 LYSMD4Q5XG99 296 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 TIAM2Q8IVF5 1701 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 ARG1P05089 322 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 LIMS3P0CW19 117 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 LIMS4P0CW20 117 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 FAM3AP98173 230 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 C17orf78Q8N4C9 275 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 ISOC2Q96AB3 205 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 LPAR5Q9H1C0 372 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF256Q9Y2P7 627 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-201ENST00000299333 CROCCQ5TZA2 2017 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 SH2D1BO14796 132 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 ZNF816Q0VGE8 651 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-201ENST00000299333 OR8G1Q15617 311 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 ACSM6Q6P461 480 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 CBLN2Q8IUK8 224 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 ATG101Q9BSB4 218 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 LRFN3Q9BTN0 628 aa13.45□□□□□ -0.26
SCN3B-201ENST00000299333 FGF20Q9NP95 211 aaPredicted RBP13.45□□□□□ -0.26
SCN3B-201ENST00000299333 SLCO2B1O94956 709 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 COMPP49747 757 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-201ENST00000299333 ERHP84090 104 aaKnown RBP13.44□□□□□ -0.26
SCN3B-201ENST00000299333 TMEM267Q0VDI3 215 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-201ENST00000299333 OIT3Q8WWZ8 545 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 SIGLEC11Q96RL6 698 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 GAGE10A6NGK3 116 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 GLB1P16278 677 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 ABCD3P28288 659 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 TIAL1Q01085 375 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCN3B-201ENST00000299333 PBOV1Q9GZY1 135 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 R4GMQ9 66 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 TCRBV16S1A1N1A0A5B0 115 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 NRASP01111 189 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 CDC34P49427 236 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-201ENST00000299333 SSBP1Q04837 148 aaKnown RBP13.44□□□□□ -0.26
SCN3B-201ENST00000299333 SP6Q3SY56 376 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 NHLRC1Q6VVB1 395 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 MYPOPQ86VE0 399 aaPredicted RBP13.44□□□□□ -0.26
SCN3B-201ENST00000299333 NDUFB6O95139 128 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 RTL8BQ17RB0 113 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 TCTN3Q6NUS6 607 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 CARFQ8N187 725 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 RLN3Q8WXF3 142 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 CYSLTR2Q9NS75 346 aa13.44□□□□□ -0.26
SCN3B-201ENST00000299333 ANKRD10Q9NXR5 420 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms