RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 GABARAPL1Q9H0R8 117 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 SLC35D1Q9NTN3 355 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 EIF1BO60739 113 aaKnown RBP13.89□□□□□ -0.19
FNDC1-201ENST00000297267 MVDP53602 400 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 LHFPL2Q6ZUX7 228 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 OR13C8Q8NGS7 320 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 MENTQ9BUN1 341 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 S1PR5Q9H228 398 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 BCO1Q9HAY6 547 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 MMACHCQ9Y4U1 282 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 AGFG2O95081 481 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 CDK5R1Q15078 307 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 C11orf40Q8WZ69 217 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 ARHGAP5-AS1Q96IT6 56 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 CXorf58Q96LI9 332 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 PRELID3BQ9Y3B1 194 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 EPXP11678 715 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 CA6P23280 308 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 ABCD3P28288 659 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 ZNF266Q14584 549 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 THEM4Q5T1C6 240 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 SPINK14Q6IE38 97 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 CD300LGQ6UXG3 332 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 LINC01555Q8NAE3 123 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 OR10AD1Q8NGE0 317 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 EID2BQ96D98 161 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 MRPS24Q96EL2 167 aaKnown RBP13.89□□□□□ -0.19
FNDC1-201ENST00000297267 MISP3Q96FF7 219 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 COL16A1Q07092 1604 aaPredicted RBP13.89□□□□□ -0.19
FNDC1-201ENST00000297267 LRP5LA4QPB2 252 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 GALNT16Q8N428 558 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 OR13D1Q8NGV5 346 aa13.89□□□□□ -0.19
FNDC1-201ENST00000297267 TMEFF2Q9UIK5 374 aaPredicted RBP13.89□□□□□ -0.19
FNDC1-201ENST00000297267 COL22A1Q8NFW1 1626 aaPredicted RBP13.89□□□□□ -0.19
FNDC1-201ENST00000297267 ZNF638Q14966 1978 aaKnown RBP13.88□□□□□ -0.19
FNDC1-201ENST00000297267 SFTA3P0C7M3 94 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CT45A6P0DMU7 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CT45A5P0DMU8 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CT45A7P0DMV0 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CT45A8P0DMV1 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CT45A9P0DMV2 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 LSM11P83369 360 aaKnown RBP eCLIP13.88□□□□□ -0.19
FNDC1-201ENST00000297267 OR5I1Q13606 314 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 HLA-BQ31612 363 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CT45A2Q5DJT8 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CT45A1Q5HYN5 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 COMMD1Q8N668 190 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 OR5M8Q8NGP6 311 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 OR5B3Q8NH48 314 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CT45A3Q8NHU0 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 COL4A1P02462 1669 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 CTSVO60911 334 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 FABP4P15090 132 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 MGMTP16455 207 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 SLC37A1P57057 533 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 ZNF117Q03924 483 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 ASAH1Q13510 395 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 PCK2Q16822 640 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 FAM109BQ6ICB4 259 aaPredicted RBP13.88□□□□□ -0.19
FNDC1-201ENST00000297267 TOX2Q96NM4 488 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 MED18Q9BUE0 208 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 TMEM129A0AVI4 362 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 WNT11O96014 354 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 LALBAP00709 142 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 DIO1P49895 249 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 DHRS4L2Q6PKH6 230 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 UBE3DQ7Z6J8 389 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 ZDHHC23Q8IYP9 409 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 FAM26EQ8N5C1 309 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 TMEM178AQ8NBL3 297 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 OR10AC1Q8NH08 325 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 ZNRF4Q8WWF5 429 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 FBXO17Q96EF6 278 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 JAM3Q9BX67 310 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 LAT2Q9GZY6 243 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 UBE2ZQ9H832 354 aaPredicted RBP13.88□□□□□ -0.19
FNDC1-201ENST00000297267 ZNF71Q9NQZ8 489 aaPredicted RBP13.88□□□□□ -0.19
FNDC1-201ENST00000297267 TIMM10BQ9Y5J6 103 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 ZNF85Q03923 595 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 EXT1Q16394 746 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 MRM1Q6IN84 353 aaKnown RBP13.88□□□□□ -0.19
FNDC1-201ENST00000297267 MOB3BQ86TA1 216 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 MMP17Q9ULZ9 603 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 MASP2O00187 686 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 LYZL6O75951 148 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 KRASP01116 189 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 TGIF2LXQ8IUE1 241 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 OR1J1Q8NGS3 322 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 POM121Q96HA1 1249 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 B9D1Q9UPM9 204 aa13.88□□□□□ -0.19
FNDC1-201ENST00000297267 A0A1W2PPQ1 181 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 ZNF727A8MUV8 499 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 MT-ATP6P00846 226 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 CHRNB4P30926 498 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 XAF1Q6GPH4 301 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 DRAM2Q6UX65 266 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 TDHQ8IZJ6 230 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 C17orf47Q8NEP4 570 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 OR2G2Q8NGZ5 317 aa13.87□□□□□ -0.19
FNDC1-201ENST00000297267 FOXJ3Q9UPW0 622 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms