RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PGAP1Q75T13 922 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 GALNT16Q8N428 558 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 GVQW1Q8N7I0 195 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 INTS12Q96CB8 462 aaKnown RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 LINC00615Q96LM1 132 aaPredicted RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 ZFP64Q9NPA5 681 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 UFSP2Q9NUQ7 469 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 PCDHGA9Q9Y5G4 932 aaKnown RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 ABCA7Q8IZY2 2146 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 A0A1W2PPC1 479 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 BCL2L11O43521 198 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 IGHA1P01876 353 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 RNF4P78317 190 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 MRPS34P82930 218 aaKnown RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 CLN3Q13286 438 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 PPP1R1AQ13522 171 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 LILRB2Q8N423 598 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 BCORP1Q8N888 145 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 KCNG3Q8TAE7 436 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 NUBPLQ8TB37 319 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 GNG12Q9UBI6 72 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 ZNF230Q9UIE0 474 aaPredicted RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 PCDHGA5Q9Y5G8 931 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 SIPA1L1O43166 1804 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 CTSVO60911 334 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 ICOSLGO75144 302 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 NMBP08949 121 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 KIR2DL1P43626 348 aaPredicted RBP12.07□□□□□ -0.48
HPS3-201ENST00000296051 PPP1CAP62136 330 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 CLEC12BQ2HXU8 276 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 LAMTOR1Q6IAA8 161 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 MAML2Q8IZL2 1156 aaPredicted RBP12.07□□□□□ -0.48
HPS3-201ENST00000296051 OR5AS1Q8N127 324 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 PSMF1Q92530 271 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 RHOFQ9HBH0 211 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 EXOSC3Q9NQT5 275 aaKnown RBP12.07□□□□□ -0.48
HPS3-201ENST00000296051 BMP5P22003 454 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 TAGLN2P37802 199 aaKnown RBP12.07□□□□□ -0.48
HPS3-201ENST00000296051 PRTGQ2VWP7 1150 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 WDR38Q5JTN6 314 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 ARIH2OSQ8N7S6 290 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 OR56B1Q8NGI3 324 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 OR4D10Q8NGI6 311 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 OCSTAMPQ9BR26 566 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 MRPL22Q9NWU5 206 aaKnown RBP12.07□□□□□ -0.48
HPS3-201ENST00000296051 GREB1LQ9C091 1923 aaPredicted RBP12.07□□□□□ -0.48
HPS3-201ENST00000296051 FAM74A7A6NL05 159 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 FAM74A3Q4VXF1 159 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 LPCAT3Q6P1A2 487 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 OR1S1Q8NH92 325 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 CA5BP1Q8WTZ4 195 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 SECTM1Q8WVN6 248 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
HPS3-201ENST00000296051 ABCA1O95477 2261 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 SDK2Q58EX2 2172 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 IGHV3-15A0A0B4J1V0 119 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 A0A1B0GTQ1 180 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 TUBAL3A6NHL2 446 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 DAOP14920 347 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 FCGR2CP31995 323 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 ARL6IP1Q15041 203 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 HAGHQ16775 308 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 DCAF12L2Q5VW00 463 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 TTC9Q92623 222 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 KTI12Q96EK9 354 aaPredicted RBP12.07□□□□□ -0.48
HPS3-201ENST00000296051 C12orf10Q9HB07 376 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 B9D1Q9UPM9 204 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 CENPFP49454 3210 aa12.07□□□□□ -0.48
HPS3-201ENST00000296051 ANKRD20A5PA0PJZ0 165 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 TSTD3H0UI37 97 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 KLF9Q13886 244 aaPredicted RBP12.06□□□□□ -0.48
HPS3-201ENST00000296051 SLC17A1Q14916 467 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 ZNF684Q5T5D7 378 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 FCRL6Q6DN72 434 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 HIST2H3AQ71DI3 136 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 GCNT2Q8N0V5 402 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 OR51A4Q8NGJ6 313 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 PRR7Q8TB68 274 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 WDR34Q96EX3 536 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 NELFAQ9H3P2 528 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 RAB9BQ9NP90 201 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 GFOD1Q9NXC2 390 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 MED12Q93074 2177 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 A0A0B4J2E0 115 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 A0A1B0GX12 115 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 UMAD1C9J7I0 102 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 BHLHE40O14503 412 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 HEXAP06865 529 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 KCNJ3P48549 501 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 ASCL1P50553 236 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 RAB5CP51148 216 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 RPL27P61353 136 aaKnown RBP12.06□□□□□ -0.48
HPS3-201ENST00000296051 WIPI1Q5MNZ9 446 aaPredicted RBP12.06□□□□□ -0.48
HPS3-201ENST00000296051 LYG2Q86SG7 212 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 C19orf43Q9BQ61 176 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 RSRP1Q9BUV0 290 aa12.06□□□□□ -0.48
HPS3-201ENST00000296051 ABHD6Q9BV23 337 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms