RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 A0A1W2PN81 502 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 PSMB5P28074 263 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 RBM11P57052 281 aaKnown RBP10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 CD81P60033 236 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 MAMSTRQ6ZN01 415 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 SHISA6Q6ZSJ9 500 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 LRRTM3Q86VH5 581 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 RSG1Q9BU20 258 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 MBLAC1A4D2B0 266 aaPredicted RBP10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 ENPP1P22413 925 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 LGALSLQ3ZCW2 172 aaPredicted RBP10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 ACSM5Q6NUN0 579 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 OR10P1Q8NGE3 313 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 ZNF426Q9BUY5 554 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC17A9Q9BYT1 436 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 LIPGQ9Y5X9 500 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 FAM24AA6NFZ4 105 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 ST8SIA5O15466 376 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 SEMA3BQ13214 749 aa10.7□□□□□ -0.7
SHROOM3-201ENST00000296043 MZT1Q08AG7 82 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 FDX2Q6P4F2 183 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 NTMQ9P121 344 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 FBXL17Q9UF56 701 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 A0A1B0GWA3 101 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 FCMRO60667 390 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 GABREP78334 506 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 SOD3P08294 240 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 NPY1RP25929 384 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 CAMPP49913 170 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 LY6G5CQ5SRR4 150 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 SAMD13Q5VXD3 122 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 SMIM14Q96QK8 99 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 SCN4AP35499 1836 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 FKBP1AP62942 108 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 ZNF542PQ5EBM4 170 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 CRYM-AS1A6NIL9 109 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 ZNF264O43296 627 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 TGM5O43548 720 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 DUS4LO95620 317 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 GPANK1O95872 356 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 CYB5R3P00387 301 aaPredicted RBP10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 CXCL3P19876 107 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 CD96P40200 585 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 GPR12P47775 334 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 BPIFB3P59826 476 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 HSPB9Q9BQS6 159 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 CHST6Q9GZX3 395 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 LINC00597Q9H2U6 94 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 MOKQ9UQ07 419 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 AESQ08117 197 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 ZNF880Q6PDB4 577 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC26A10Q8NG04 563 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 TOE1Q96GM8 510 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 GPR137Q96N19 417 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 HINT3Q9NQE9 182 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 FAM3AP98173 230 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 MDGA1Q8NFP4 955 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 OR51F2Q8NH61 342 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 SHISA4Q96DD7 197 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 SPTAN1Q13813 2472 aaKnown RBP10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 PTHLHP12272 177 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 IER3P46695 156 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 TMEM176BQ3YBM2 270 aaPredicted RBP10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC35E4Q6ICL7 350 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 OR1L3Q8NH93 324 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 DMRT1Q9Y5R6 373 aa10.69□□□□□ -0.7
SHROOM3-201ENST00000296043 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 SSBP1Q04837 148 aaKnown RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 IHHQ14623 411 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 MMP21Q8N119 569 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC17A4Q9Y2C5 497 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 C1orf167Q5SNV9 1468 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 LINC00587B1AMM8 73 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 B4DEV8 164 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 CNIH1O95406 144 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 ZNF273Q14593 569 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 CSF3RQ99062 836 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 IKZF5Q9H5V7 419 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 ARFGEF3Q5TH69 2177 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 TCRBV5S2A0A599 114 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 FAM87AP0C7U9 286 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 HSPB8Q9UJY1 196 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 HMSDA8MTL9 139 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 B3GALT4O96024 378 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 RPS21P63220 83 aaKnown RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 MANSC4A6NHS7 340 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 OR52A4PA6NMU1 304 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 HIST1H1TP22492 207 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 SPCS3P61009 180 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 PPP1R1AQ13522 171 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 TPGS2Q68CL5 300 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 OVCH2Q7RTZ1 564 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 SPICQ8N5J4 248 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 ALKBH7Q9BT30 221 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 RBM38Q9H0Z9 239 aaKnown RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 ARG2P78540 354 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 GUCA2BQ16661 112 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 DRAM2Q6UX65 266 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 SSX8Q7RTT4 187 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms