RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ZNF133P52736 654 aaPredicted RBP14.79□□□□□ -0.04
CPSF4-201ENST00000292476 EFNB2P52799 333 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 TSPAN5P62079 268 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 FMODQ06828 376 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 ETFDHQ16134 617 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 ODF4Q2M2E3 257 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 ADGRE4PQ86SQ3 457 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 FTMTQ8N4E7 242 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 TMEM229BQ8NBD8 167 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 ST7LQ8TDW4 575 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 TMEM54Q969K7 222 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 MYOZ1Q9NP98 299 aaPredicted RBP14.79□□□□□ -0.04
CPSF4-201ENST00000292476 G6PC2Q9NQR9 355 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 OR52A1Q9UKL2 312 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 ATRXP46100 2492 aa14.79□□□□□ -0.04
CPSF4-201ENST00000292476 PLSCR5A0PG75 271 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 OR6C65A6NJZ3 312 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 PYCARD-AS1I3L0S3 204 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 DOK2O60496 412 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 PRB1P04280 392 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 QDPRP09417 244 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 ANXA7P20073 488 aaKnown RBP14.78□□□□□ -0.04
CPSF4-201ENST00000292476 MMP16P51512 607 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 TAS2R19P59542 299 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 C10orf128Q5T292 105 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 CARD17Q5XLA6 110 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 OR13C3Q8NGS6 347 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 CITED4Q96RK1 184 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 GINS4Q9BRT9 223 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 PARPBPQ9NWS1 579 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 TAS2R4Q9NYW5 299 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 GTF2A1LQ9UNN4 478 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 MAB21L2Q9Y586 359 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 FLVCR1Q9Y5Y0 555 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 PIEZO2Q9H5I5 2752 aa14.78□□□□□ -0.04
CPSF4-201ENST00000292476 LOC107986453A0A1B0GWG9 222 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 ZNF716A6NP11 495 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 HMSDA8MTL9 139 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 M0R233 179 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 GTF2F2P13984 249 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 ZNF84P51523 738 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 AP2S1P53680 142 aaPredicted RBP14.77□□□□□ -0.04
CPSF4-201ENST00000292476 EXOSC2Q13868 293 aaKnown RBP14.77□□□□□ -0.04
CPSF4-201ENST00000292476 RNPS1Q15287 305 aaKnown RBP14.77□□□□□ -0.04
CPSF4-201ENST00000292476 KCNMB1Q16558 191 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 RHOUQ7L0Q8 258 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 RNF133Q8WVZ7 376 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 ZNF385AQ96PM9 386 aaKnown RBP14.77□□□□□ -0.04
CPSF4-201ENST00000292476 PRRG4Q9BZD6 226 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 ATG5Q9H1Y0 275 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 RNF122Q9H9V4 155 aa14.77□□□□□ -0.04
CPSF4-201ENST00000292476 SMG1Q96Q15 3661 aaKnown RBP14.77□□□□□ -0.04
CPSF4-201ENST00000292476 CNTRLQ7Z7A1 2325 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 IGKV3D-15A0A087WSY6 115 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 A0A1W2PPL8 197 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 MKRN2OSH3BPM6 223 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 MPC2O95563 127 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 LSM6P62312 80 aaKnown RBP14.77□□□□□ -0.05
CPSF4-201ENST00000292476 SRYQ05066 204 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 ZNF169Q14929 603 aaPredicted RBP14.77□□□□□ -0.05
CPSF4-201ENST00000292476 RAB12Q6IQ22 244 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 FAAP20Q6NZ36 180 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 STEAP1BQ6NZ63 245 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 AAED1Q7RTV5 226 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 DCXRQ7Z4W1 244 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 BIVMQ86UB2 503 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 C20orf196Q8IYI0 205 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 ELMOD2Q8IZ81 293 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 TMEM123Q8N131 208 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 OR8H3Q8N146 312 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 ZIC4Q8N9L1 334 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 OR2AJ1Q8NGZ0 328 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 CCDC107Q8WV48 283 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 ROBO4Q8WZ75 1007 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 TMEM45BQ96B21 275 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 SLC25A21Q9BQT8 299 aaPredicted RBP14.77□□□□□ -0.05
CPSF4-201ENST00000292476 DPCDQ9BVM2 203 aaPredicted RBP14.77□□□□□ -0.05
CPSF4-201ENST00000292476 C1orf198Q9H425 327 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 SEC61A2Q9H9S3 476 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 EMC9Q9Y3B6 208 aa14.77□□□□□ -0.05
CPSF4-201ENST00000292476 RPS10-NUDT3A0A1W2PQS6 291 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 SCGNO76038 276 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 KDM4BO94953 1096 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 IGHG3P01860 377 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 VSIG10L2P0DP72 767 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 KLK2P20151 261 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 GRK1Q15835 563 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 GLYATL3Q5SZD4 288 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.76□□□□□ -0.05
CPSF4-201ENST00000292476 LYPD6Q86Y78 171 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 CCDC28AQ8IWP9 274 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 GABRG1Q8N1C3 465 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 PLPP7Q8NBV4 271 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 C11orf40Q8WZ69 217 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 WBP1Q96G27 269 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 FOXN4Q96NZ1 517 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 ULBP2Q9BZM5 246 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 DEFB127Q9H1M4 99 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 CA10Q9NS85 328 aa14.76□□□□□ -0.05
CPSF4-201ENST00000292476 FOXD3Q9UJU5 478 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms