RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 EIF5AP63241 154 aaKnown RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 CEACAM16Q2WEN9 425 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 TSPO2Q5TGU0 170 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 KCNG3Q8TAE7 436 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SPACA9Q96E40 222 aaPredicted RBP4.28□□□□□ -1.72
UBR1-201ENST00000290650 MED30Q96HR3 178 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 ETV7Q9Y603 341 aa4.28□□□□□ -1.72
UBR1-201ENST00000290650 SHISA7A6NL88 538 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 IFNA5P01569 189 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 OR13C7P0DN81 318 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 GLRA1P23415 457 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 UBE2IP63279 158 aaKnown RBP4.28□□□□□ -1.73
UBR1-201ENST00000290650 MRPS34P82930 218 aaKnown RBP4.28□□□□□ -1.73
UBR1-201ENST00000290650 EGR3Q06889 387 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 PLEKHN1Q494U1 663 aaPredicted RBP4.28□□□□□ -1.73
UBR1-201ENST00000290650 THEM4Q5T1C6 240 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 OR8G2PQ6IF36 304 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 RNF165Q6ZSG1 346 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 CMTM1Q8IZ96 169 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 ZNF680Q8NEM1 530 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 SYT3Q9BQG1 590 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 AKIRIN1Q9H9L7 192 aaPredicted RBP4.28□□□□□ -1.73
UBR1-201ENST00000290650 KCNIP1Q9NZI2 227 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 MYOTQ9UBF9 498 aa4.28□□□□□ -1.73
UBR1-201ENST00000290650 FRMPD3Q5JV73 1810 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SZT2Q5T011 3432 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 TIAF1O95411 115 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 HPXP02790 462 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 GCH1P30793 250 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ARF1P84077 181 aaKnown RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 CLEC12BQ2HXU8 276 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 DEFB109BQ30KR1 87 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 Q5BKY6 102 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 AKR1C8PQ5T2L2 129 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SLC25A26Q70HW3 274 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 RABEPKQ7Z6M1 372 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 TMEM200AQ86VY9 491 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 NAXDQ8IW45 347 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 CRIPAKQ8N1N5 446 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 MUC20Q8N307 709 aaPredicted RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 OR11H7Q8NGC8 314 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 PPP1R1CQ8WVI7 109 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ARL11Q969Q4 196 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 FBXW5Q969U6 566 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SULT4A1Q9BR01 284 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 FAAP24Q9BTP7 215 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SDHAF2Q9NX18 166 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 DOCK11Q5JSL3 2073 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SSSCA1O60232 199 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 EPPINO95925 133 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 TK1P04183 234 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 TPOP07202 933 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ZNF728P0DKX0 622 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 HNF1AP20823 631 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 BDH1Q02338 343 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 CD276Q5ZPR3 534 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ZNRF4Q8WWF5 429 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 VWCEQ96DN2 955 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 PCDHB16Q9NRJ7 776 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 COLQQ9Y215 455 aaPredicted RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 MN1Q10571 1320 aaPredicted RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 IGHV5-10-1A0A0J9YXX1 117 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 IFNA17P01571 189 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 RAF1P04049 648 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 NFYBP25208 207 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 MLF1P58340 268 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 NXPH1P58417 271 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 MGAT2Q10469 447 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 PLA2G7Q13093 441 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 PCK2Q16822 640 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ADGRG3Q86Y34 549 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 PXT1Q8NFP0 134 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ANGPTL6Q8NI99 470 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 OR8B4Q96RC9 309 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ZNF286AQ9HBT8 521 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 HTTP42858 3142 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SPTAN1Q13813 2472 aaKnown RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 TRAV39A0A0B4J263 110 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 LOC101059948A0A1B0GTJ6 334 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 LILRA5A6NI73 299 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 MCRIP1C9JLW8 97 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 NRASP01111 189 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 CCL3P10147 92 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 GPR3P46089 330 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SELENOVP59797 346 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 S100A12P80511 92 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SPINK9Q5DT21 86 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 NOXO1Q8NFA2 376 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 RBPMSQ93062 196 aaKnown RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 PKDREJQ9NTG1 2253 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 TCRBV16S1A1N1A0A5B0 115 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 CTAG2O75638 210 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 MGMTP16455 207 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 IL2RGP31785 369 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 FABP6P51161 128 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 MMP15P51511 669 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ELLP55199 621 aaPredicted RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 MRPS10P82664 201 aaKnown RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 SKP2Q13309 424 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 TESK1Q15569 626 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms