RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 STRAPQ9Y3F4 350 aaKnown RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF646O15015 1829 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 TRGV8A0A0C4DH27 118 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 K7ESF4 209 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 HPP00738 406 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 CD14P08571 375 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 CCL4P13236 92 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 APLNRP35414 380 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 GGNBP1Q5YKI7 109 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 STAC2Q6ZMT1 411 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 SYS1Q8N2H4 156 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 OR2Y1Q8NGV0 311 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 MARCH1Q8TCQ1 289 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 A0A1W2PR48 441 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 IRF2P14316 349 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ENPP1P22413 925 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF93P35789 620 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 CSNK1A1P48729 337 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 C2orf76Q3KRA6 126 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 FAM199XQ6PEV8 388 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 MAMSTRQ6ZN01 415 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 C15orf54Q8N8G6 183 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 NUDCD2Q8WVJ2 157 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 VWCEQ96DN2 955 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF286AQ9HBT8 521 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 TMEM184BQ9Y519 407 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 TRAV1-2A0A0B4J238 106 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 TK1P04183 234 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 DBHP09172 617 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ABCD3P28288 659 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 BTG2P78543 158 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 RAB31Q13636 194 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ATPAF1Q5TC12 328 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 B3GNTL1Q67FW5 361 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ANGPTL5Q86XS5 388 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 SEMA6DQ8NFY4 1073 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 RBM24Q9BX46 236 aaKnown RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 UQCC1Q9NVA1 299 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 TCFL5Q9UL49 500 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 LAMP3Q9UQV4 416 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 C20orf202A1L168 122 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 C8orf82Q6P1X6 216 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 LGI3Q8N145 548 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 COMMD1Q8N668 190 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 SECTM1Q8WVN6 248 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 OR52A1Q9UKL2 312 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 CYC1P08574 325 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 MGST1P10620 155 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 PSMB3P49720 205 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 SLC35D3Q5M8T2 416 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 LCN15Q6UWW0 184 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF574Q6ZN55 896 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF687Q8N1G0 1237 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 SLC25A45Q8N413 288 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 IL1F10Q8WWZ1 152 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 NXF2Q9GZY0 626 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 RAB33BQ9H082 229 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 hCG_1809904A0A1W2PP81 198 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 A0A1W2PR64 198 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 A0A1W2PRV1 198 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 IGF2P01344 180 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 EFNA3P52797 238 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 OR1C1Q15619 314 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 TOMM34Q15785 309 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF766Q5HY98 468 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 FCRL6Q6DN72 434 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 PRSS35Q8N3Z0 413 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 PLK3Q9H4B4 646 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 A0A1W2PPH5 198 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 A0A1W2PPQ1 181 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 ANKUB1A6NFN9 424 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 CHRM2P08172 466 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 GCH1P30793 250 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 BSGP35613 385 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 ATP1B3P54709 279 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 MOGAT2Q3SYC2 334 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF626Q68DY1 528 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 NKAIN3Q8N8D7 197 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 ZFP62Q8NB50 900 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 ZCCHC14Q8WYQ9 949 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 INTS12Q96CB8 462 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 TINAGL1Q9GZM7 467 aaPredicted RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 RYDENQ9NUL5 291 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 TP53TG5Q9Y2B4 290 aa10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 NOSIPQ9Y314 301 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-201ENST00000289547 SDCBPO00560 298 aaPredicted RBP10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 XRCC3O43542 346 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 ARG1P05089 322 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 CHRM4P08173 479 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 HIST1H1CP16403 213 aaKnown RBP10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 ACP1P24666 158 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 MLF1P58340 268 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 HBG1P69891 147 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 HBG2P69892 147 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 RUNX2Q13950 521 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 TIPARPQ7Z3E1 657 aaKnown RBP10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
NPC1L1-201ENST00000289547 TRMT61AQ96FX7 289 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms