RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ZNF416Q9BWM5 594 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 OCIAD1Q9NX40 245 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 KCNK7Q9Y2U2 307 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 S100A6P06703 90 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 HTR5AP47898 357 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 PCK2Q16822 640 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 AKR7LQ8NHP1 331 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 EIF5A2Q9GZV4 153 aaKnown RBP14.12□□□□□ -0.15
SMAD6-201ENST00000288840 MTCH2Q9Y6C9 303 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 MED6O75586 246 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 ZNF16P17020 682 aaPredicted RBP14.12□□□□□ -0.15
SMAD6-201ENST00000288840 AKR1C3P42330 323 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 HERV-K104P61576 105 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 C21orf62-AS1Q17RA5 79 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 THEM4Q5T1C6 240 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 C6orf201Q7Z4U5 140 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 KCNIP3Q9Y2W7 256 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 WIF1Q9Y5W5 379 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 PCDH15Q96QU1 1955 aa14.12□□□□□ -0.15
SMAD6-201ENST00000288840 C9orf170A2RU37 121 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 TNFSF11O14788 317 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 TXNDC12O95881 172 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 ACOT7LQ6ZUV0 252 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 ZNF501Q96CX3 271 aaPredicted RBP14.11□□□□□ -0.15
SMAD6-201ENST00000288840 MBTPS2O43462 519 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 MGMTP16455 207 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 TMEM71Q6P5X7 295 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 OGFOD3Q6PK18 319 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 OR2W3Q7Z3T1 314 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 VASH2Q86V25 355 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 SGPP2Q8IWX5 399 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 ZFP82Q8N141 532 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 EXD3Q8N9H8 876 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 ZSCAN1Q8NBB4 408 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 TTC28Q96AY4 2481 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 CMSS1Q9BQ75 279 aaKnown RBP14.11□□□□□ -0.15
SMAD6-201ENST00000288840 F12P00748 615 aaPredicted RBP14.11□□□□□ -0.15
SMAD6-201ENST00000288840 RAB6AP20340 208 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 CAV2P51636 162 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 TAGLNQ01995 201 aaKnown RBP14.11□□□□□ -0.15
SMAD6-201ENST00000288840 CFHR1Q03591 330 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 RNF144BQ7Z419 303 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 MCEMP1Q8IX19 187 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 D2HGDHQ8N465 521 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 OR1S2Q8NGQ3 325 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 FNDC9Q8TBE3 224 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 SPTSSAQ969W0 71 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 PCDHB16Q9NRJ7 776 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 PCDHB10Q9UN67 800 aa14.11□□□□□ -0.15
SMAD6-201ENST00000288840 LIPT2A6NK58 231 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 MTRF1O75570 445 aaKnown RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 DIRAS3O95661 229 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 B4GALT1P15291 398 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 RPS18P62269 152 aaKnown RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 ZNF660Q6AZW8 331 aaPredicted RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 C5orf46Q6UWT4 87 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 ARL11Q969Q4 196 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 ZNF845Q96IR2 970 aaPredicted RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 ZNF2Q9BSG1 426 aaPredicted RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 KIF25Q9UIL4 384 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 PCNX3Q9H6A9 2034 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 PRRC2CQ9Y520 2896 aaKnown RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 H3BUI4 141 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 ASCL1P50553 236 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 RRADP55042 308 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 RBM39Q14498 530 aaKnown RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 MOB3CQ70IA8 216 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 RPS19BP1Q86WX3 136 aaKnown RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 TERB2Q8NHR7 220 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 NAA11Q9BSU3 229 aaPredicted RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 POLEQ07864 2286 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 RPS10-NUDT3A0A1W2PQS6 291 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 M0R135 149 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 BET1O15155 118 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 PPT1P50897 306 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 DMWDQ09019 674 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 SPACA9Q96E40 222 aaPredicted RBP14.1□□□□□ -0.15
SMAD6-201ENST00000288840 ZNF799Q96GE5 643 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 FAM96BQ9Y3D0 163 aa14.1□□□□□ -0.15
SMAD6-201ENST00000288840 XRCC2O43543 280 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 CCL4P13236 92 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 CYCSP99999 105 aaKnown RBP14.09□□□□□ -0.15
SMAD6-201ENST00000288840 KISS1Q15726 138 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 OR5L1Q8NGL2 311 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 ZNF519Q8TB69 540 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 HDHD3Q9BSH5 251 aaPredicted RBP14.09□□□□□ -0.15
SMAD6-201ENST00000288840 C20orf24Q9BUV8 137 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.09□□□□□ -0.15
SMAD6-201ENST00000288840 GDF1P27539 372 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 GNRHRP30968 328 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 SLC35A1P78382 337 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 ZNF684Q5T5D7 378 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 HSD17B11Q8NBQ5 300 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 NOXO1Q8NFA2 376 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 BPIFCQ8NFQ6 507 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 C2CD4CQ8TF44 421 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 MARC2Q969Z3 335 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 RASL10BQ96S79 203 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 A0A096LPE4 126 aa14.09□□□□□ -0.15
SMAD6-201ENST00000288840 A0A1W2PPZ6 126 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms