RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 INTS12Q96CB8 462 aaKnown RBP16.91■□□□□ 0.3
BRAF-201ENST00000288602 SLC23A1Q9UHI7 598 aa16.91■□□□□ 0.3
BRAF-201ENST00000288602 BOKQ9UMX3 212 aaPredicted RBP16.91■□□□□ 0.3
BRAF-201ENST00000288602 A0A0A6YYD4 124 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 SULT1C2O00338 296 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 DNPH1O43598 174 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 MPIG6BO95866 241 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 DNASE1P24855 282 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 SCGB2B2Q4G0G5 96 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 IDO2Q6ZQW0 420 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 TRAPPC6BQ86SZ2 158 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 GPR137CQ8N3F9 429 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 AKR7LQ8NHP1 331 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 C1orf147Q96MC9 270 aaPredicted RBP16.9■□□□□ 0.3
BRAF-201ENST00000288602 TRAF4Q9BUZ4 470 aaPredicted RBP16.9■□□□□ 0.3
BRAF-201ENST00000288602 GON7Q9BXV9 100 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 EXO5Q9H790 373 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 FREM1Q5H8C1 2179 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 LOC100509620A0A075B734 347 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 TMEM14DPA8MWL7 114 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 ZNF736B4DX44 427 aaPredicted RBP16.9■□□□□ 0.3
BRAF-201ENST00000288602 G3V3Q6 166 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 SSTR2P30874 369 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 MAGEA5P43359 124 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 HGFACQ04756 655 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 TGIF1Q15583 401 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 C2orf68Q2NKX9 166 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 TMEM229BQ8NBD8 167 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 FGFBP3Q8TAT2 258 aa16.9■□□□□ 0.3
BRAF-201ENST00000288602 PRRC2CQ9Y520 2896 aaKnown RBP16.9■□□□□ 0.3
BRAF-201ENST00000288602 A0A0A6YYH2 397 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 A6NJ64 397 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 TPD52L2O43399 206 aaKnown RBP16.89■□□□□ 0.29
BRAF-201ENST00000288602 SGCEO43556 437 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 SIX6O95475 246 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 UBE2V2Q15819 145 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 CEACAM16Q2WEN9 425 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 ABLIM2Q6H8Q1 611 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 C1QL2Q7Z5L3 287 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 IL22RA1Q8N6P7 574 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 FAM173AQ9BQD7 235 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 ZNF703Q9H7S9 590 aaPredicted RBP16.89■□□□□ 0.29
BRAF-201ENST00000288602 SCPEP1Q9HB40 452 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 GPN1Q9HCN4 374 aaPredicted RBP16.89■□□□□ 0.29
BRAF-201ENST00000288602 TMEM38BQ9NVV0 291 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 EMC3Q9P0I2 261 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 PIGLQ9Y2B2 252 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 SOCS1O15524 211 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 IGLV3-1P01715 115 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 OTX1P32242 354 aaPredicted RBP16.89■□□□□ 0.29
BRAF-201ENST00000288602 CASRP41180 1078 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 MECP2P51608 486 aaKnown RBP16.89■□□□□ 0.29
BRAF-201ENST00000288602 TMED4Q7Z7H5 227 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 ZNF584Q8IVC4 421 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 CDC6Q99741 560 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 LPAR5Q9H1C0 372 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 SLC6A15Q9H2J7 730 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 EIF3KQ9UBQ5 218 aaKnown RBP16.89■□□□□ 0.29
BRAF-201ENST00000288602 SCP2D1Q9UJQ7 156 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 NPTNQ9Y639 398 aa16.89■□□□□ 0.29
BRAF-201ENST00000288602 SPENQ96T58 3664 aaKnown RBP16.89■□□□□ 0.29
BRAF-201ENST00000288602 ITGB2P05107 769 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 ZNF32P17041 273 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 ARPC4P59998 168 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 SSBP1Q04837 148 aaKnown RBP16.88■□□□□ 0.29
BRAF-201ENST00000288602 EIF3IQ13347 325 aaKnown RBP16.88■□□□□ 0.29
BRAF-201ENST00000288602 RAB12Q6IQ22 244 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 CRIP3Q6Q6R5 217 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 MUC20Q8N307 709 aaPredicted RBP16.88■□□□□ 0.29
BRAF-201ENST00000288602 BPIFB2Q8N4F0 458 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 OR10K1Q8NGX5 313 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 OR10R2Q8NGX6 335 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 SLC6A7Q99884 636 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 POFUT1Q9H488 388 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 STMND1H3BQB6 276 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 ZNHIT1O43257 154 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 CRTAPO75718 401 aaPredicted RBP16.88■□□□□ 0.29
BRAF-201ENST00000288602 DHRS3O75911 302 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 IL5P05113 134 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 ZNF735P0CB33 412 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 TRIP6Q15654 476 aaKnown RBP16.88■□□□□ 0.29
BRAF-201ENST00000288602 KISS1Q15726 138 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 C17orf107Q6ZR85 190 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 CDH24Q86UP0 819 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 SNAPC3Q92966 411 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 PIGTQ969N2 578 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 SPTSSAQ969W0 71 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 SGK3Q96BR1 496 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 TTTY12Q9BZ98 90 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 PIPOXQ9P0Z9 390 aa16.88■□□□□ 0.29
BRAF-201ENST00000288602 SYNGR3O43761 229 aa16.87■□□□□ 0.29
BRAF-201ENST00000288602 CDC14BO60729 498 aa16.87■□□□□ 0.29
BRAF-201ENST00000288602 CAPZA1P52907 286 aa16.87■□□□□ 0.29
BRAF-201ENST00000288602 LGALSLQ3ZCW2 172 aaPredicted RBP16.87■□□□□ 0.29
BRAF-201ENST00000288602 C4orf46Q504U0 113 aa16.87■□□□□ 0.29
BRAF-201ENST00000288602 C9orf135Q5VTT2 229 aa16.87■□□□□ 0.29
BRAF-201ENST00000288602 JMJD6Q6NYC1 403 aaPredicted RBP16.87■□□□□ 0.29
BRAF-201ENST00000288602 CPNE4Q96A23 557 aaPredicted RBP16.87■□□□□ 0.29
BRAF-201ENST00000288602 MED30Q96HR3 178 aa16.87■□□□□ 0.29
BRAF-201ENST00000288602 FOXB1Q99853 325 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms