RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 ADAT1Q9BUB4 502 aaKnown RBP16.61■□□□□ 0.25
PCDH1-201ENST00000287008 FABP7O15540 132 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 LYZL6O75951 148 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 HLA-HP01893 362 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 FUT7Q11130 342 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 POU4F3Q15319 338 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 OR2T2Q6IF00 324 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 CCDC71Q8IV32 467 aaPredicted RBP16.61■□□□□ 0.25
PCDH1-201ENST00000287008 Q8IYB0 196 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 ARHGEF39Q8N4T4 335 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 CORO2AQ92828 525 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 C12orf10Q9HB07 376 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 PLAC1Q9HBJ0 212 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 CRYM-AS1A6NIL9 109 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 ATF1P18846 271 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 FCGR2CP31995 323 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 SOX18P35713 384 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 ARL16Q0P5N6 197 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 GAB4Q2WGN9 574 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 EXOSC3Q9NQT5 275 aaKnown RBP16.61■□□□□ 0.25
PCDH1-201ENST00000287008 C20orf141Q9NUB4 165 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 ANGPTL7O43827 346 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 CD1EP15812 388 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 GNB3P16520 340 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 TBPP20226 339 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 HNRNPFP52597 415 aaKnown RBP16.61■□□□□ 0.25
PCDH1-201ENST00000287008 ISXQ2M1V0 245 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 PABPC1L2AQ5JQF8 200 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 SLC30A7Q8NEW0 376 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 PFDN5Q99471 154 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 SUCNR1Q9BXA5 334 aa16.61■□□□□ 0.25
PCDH1-201ENST00000287008 ISG20L2Q9H9L3 353 aaKnown RBP16.61■□□□□ 0.25
PCDH1-201ENST00000287008 RER1O15258 196 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 ZNF85Q03923 595 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 DEGS2Q6QHC5 323 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 ESRP2Q9H6T0 727 aaKnown RBP16.6■□□□□ 0.25
PCDH1-201ENST00000287008 LIN7CQ9NUP9 197 aaKnown RBP16.6■□□□□ 0.25
PCDH1-201ENST00000287008 SCAF4O95104 1147 aaKnown RBP16.6■□□□□ 0.25
PCDH1-201ENST00000287008 NME2P22392 152 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 DUSP1P28562 367 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 DGCR2P98153 550 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 SCGB2A2Q13296 93 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 OR4Q3Q8NH05 313 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 ZNF764Q96H86 408 aaPredicted RBP16.6■□□□□ 0.25
PCDH1-201ENST00000287008 TMEM11P17152 192 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 GPM6AP51674 278 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 DRAXINQ8NBI3 349 aaPredicted RBP16.6■□□□□ 0.25
PCDH1-201ENST00000287008 INTS1Q8N201 2190 aaKnown RBP16.6■□□□□ 0.25
PCDH1-201ENST00000287008 ASPDHA6ND91 283 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 PPT1P50897 306 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 IL34Q6ZMJ4 242 aa16.6■□□□□ 0.25
PCDH1-201ENST00000287008 LAMB2P55268 1798 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 HPNP05981 417 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 GALNSP34059 522 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 MRGPREQ86SM8 312 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 OR13C8Q8NGS7 320 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 POFUT1Q9H488 388 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.59■□□□□ 0.25
PCDH1-201ENST00000287008 K7EQM0 130 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 ERHP84090 104 aaKnown RBP16.59■□□□□ 0.25
PCDH1-201ENST00000287008 HFEQ30201 348 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 FAM109AQ8N4B1 249 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 RND1Q92730 232 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 MCHR2Q969V1 340 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 GALMQ96C23 342 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 NRTNQ99748 197 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 GLRX2Q9NS18 164 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 LAMP3Q9UQV4 416 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 PCM1Q15154 2024 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 POM121CA8CG34 1229 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 EPPINO95925 133 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 SNRNP70P08621 437 aaKnown RBP16.59■□□□□ 0.25
PCDH1-201ENST00000287008 FUT3P21217 361 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 MESP2Q0VG99 397 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 OR10R2Q8NGX6 335 aa16.59■□□□□ 0.25
PCDH1-201ENST00000287008 SLC17A2O00624 439 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 GMDSO60547 372 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 CLN5O75503 358 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 SIX6O95475 246 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 OR10A3P58181 314 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 DCAF10Q5QP82 559 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 MRM1Q6IN84 353 aaKnown RBP16.58■□□□□ 0.25
PCDH1-201ENST00000287008 MBD1Q9UIS9 605 aaPredicted RBP16.58■□□□□ 0.25
PCDH1-201ENST00000287008 TEX51A0A1B0GUA7 166 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 ADRA2CP18825 462 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 CASP3P42574 277 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 BTG1P62324 171 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 FAM74A1Q5RGS3 127 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 FGF11Q92914 225 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 ORAI1Q96D31 301 aa16.58■□□□□ 0.25
PCDH1-201ENST00000287008 SIRT3Q9NTG7 399 aaPredicted RBP16.58■□□□□ 0.25
PCDH1-201ENST00000287008 SERPINE3A8MV23 424 aa16.58■□□□□ 0.24
PCDH1-201ENST00000287008 C12orf73Q69YU5 71 aa16.58■□□□□ 0.24
PCDH1-201ENST00000287008 ZNF774Q6NX45 483 aa16.58■□□□□ 0.24
PCDH1-201ENST00000287008 NUFIP2Q7Z417 695 aaKnown RBP16.58■□□□□ 0.24
PCDH1-201ENST00000287008 SLC51BQ86UW2 128 aa16.58■□□□□ 0.24
PCDH1-201ENST00000287008 THNSL2Q86YJ6 484 aa16.58■□□□□ 0.24
PCDH1-201ENST00000287008 LYSMD2Q8IV50 215 aa16.58■□□□□ 0.24
PCDH1-201ENST00000287008 ST8SIA4Q92187 359 aa16.58■□□□□ 0.24
PCDH1-201ENST00000287008 ZNF385DQ9H6B1 395 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms