RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 STEAP1BQ6NZ63 245 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 TMED4Q7Z7H5 227 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 OR14K1Q8NGZ2 314 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 SPTSSAQ969W0 71 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 FOXRED1Q96CU9 486 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-201ENST00000279247 C12orf49Q9H741 205 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 GPR173Q9NS66 373 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 SLC7A10Q9NS82 523 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 ING4Q9UNL4 249 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 PRR14LQ5THK1 2151 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 C7orf66A4D0T2 115 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 WIPF3A6NGB9 483 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 NBL1P41271 181 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 FAPQ12884 760 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 PDSS1Q5T2R2 415 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 ABLIM2Q6H8Q1 611 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 C1QL2Q7Z5L3 287 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 SKA3Q8IX90 412 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 PIAS4Q8N2W9 510 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-201ENST00000279247 GPR35Q9HC97 309 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 CYB5AP00167 134 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 AMY2AP04746 511 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 GABRA1P14867 456 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 SPINK2P20155 84 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 FAUP35544 74 aaKnown RBP15.7■□□□□ 0.1
CAPN1-201ENST00000279247 CLDN18P56856 261 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 RABL2AQ9UBK7 228 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-201ENST00000279247 KLK13Q9UKR3 277 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 RABL2BQ9UNT1 228 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 LOC390937A0A1W2PQ73 354 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 RAB27BO00194 218 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 SYNGR4O95473 234 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 RAB3DO95716 219 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 CSF1P09603 554 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 FCGR2AP12318 317 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 SERPINA2P20848 420 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 PSG4Q00888 419 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 UBE2V2Q15819 145 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 LYPD6Q86Y78 171 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 GABRG1Q8N1C3 465 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 BATF2Q8N1L9 274 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 MEIOBQ8N635 442 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 INTS12Q96CB8 462 aaKnown RBP15.7■□□□□ 0.1
CAPN1-201ENST00000279247 RAB22AQ9UL26 194 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 RHBDD3Q9Y3P4 386 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 TTLL8A6PVC2 850 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 LDLRAD4O15165 306 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 CYTIPO60759 359 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 AKAIN1P0CW23 69 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 TRAPPC6BQ86SZ2 158 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 FJX1Q86VR8 437 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 TCTE3Q8IZS6 198 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 GPX8Q8TED1 209 aa15.7■□□□□ 0.1
CAPN1-201ENST00000279247 NAP1L6A6NFF2 107 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 SOCS1O15524 211 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 DNPH1O43598 174 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 LPLP06858 475 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 ERCC1P07992 297 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-201ENST00000279247 GSTT2P0CG29 244 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 WT1P19544 449 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-201ENST00000279247 GZMKP49863 264 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 RNFT1Q5M7Z0 435 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 RHOUQ7L0Q8 258 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 SGK3Q96BR1 496 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 CHST6Q9GZX3 395 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 FAM230AA0A1W2PPH8 454 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 HLA-HP01893 362 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 ACKR3P25106 362 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 KISS1Q15726 138 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 C17orf107Q6ZR85 190 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 OR1F12Q8NHA8 337 aa15.69■□□□□ 0.1
CAPN1-201ENST00000279247 FAM172BPA6NC97 362 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 KLRC4-KLRK1H3BQV0 150 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 DHRS3O75911 302 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ANXA3P12429 323 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 CD46P15529 392 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF584Q8IVC4 421 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 CPT1CQ8TCG5 803 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 TNFAIP8L1Q8WVP5 186 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ACTR6Q9GZN1 396 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 SLCO5A1Q9H2Y9 848 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 SLC17A5Q9NRA2 495 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ICMTO60725 284 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 NDUFB6O95139 128 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 NUBP1P53384 320 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ARF1P84077 181 aaKnown RBP15.68■□□□□ 0.1
CAPN1-201ENST00000279247 CDK10Q15131 360 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF766Q5HY98 468 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 PGAP1Q75T13 922 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 MCEMP1Q8IX19 187 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 WDR89Q96FK6 387 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-201ENST00000279247 REEP6Q96HR9 211 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 OR10A2Q9H208 303 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 MCTS1Q9ULC4 181 aaKnown RBP15.68■□□□□ 0.1
CAPN1-201ENST00000279247 KLF13Q9Y2Y9 288 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-201ENST00000279247 APC2O95996 2303 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF736B4DX44 427 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-201ENST00000279247 SYNGR3O43761 229 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ANGPTL7O43827 346 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 SIX6O95475 246 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms