RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FAAP20Q6NZ36 180 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 UTS2BQ765I0 119 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 OR2W3Q7Z3T1 314 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 TMEM229BQ8NBD8 167 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ACBD4Q8NC06 268 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 C1orf147Q96MC9 270 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-201ENST00000276573 LRFN3Q9BTN0 628 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 C20orf85Q9H1P6 137 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 OR10A4Q9H209 315 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ZDHHC11Q9H8X9 412 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 NOX3Q9HBY0 568 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 MCUBQ9NWR8 336 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 DLL3Q9NYJ7 618 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF224Q9NZL3 707 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 PIGLQ9Y2B2 252 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 CSAG2Q9Y5P2 127 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 PTPRBP23467 1997 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ICMTO60725 284 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 PEX14O75381 377 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 LCATP04180 440 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 MELTFP08582 738 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 FAHP16930 419 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 OR3A4PP47883 348 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 HTR5AP47898 357 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 GSK3AP49840 483 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 NOVA1P51513 510 aaKnown RBP8.37□□□□□ -1.07
TRIM55-201ENST00000276573 FCN2Q15485 313 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ST3GAL2Q16842 350 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 LINC00303Q3SY05 128 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 CD276Q5ZPR3 534 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 CRIP3Q6Q6R5 217 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 NUFIP2Q7Z417 695 aaKnown RBP8.37□□□□□ -1.07
TRIM55-201ENST00000276573 MCEMP1Q8IX19 187 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF101Q8IZC7 436 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 OR4C16Q8NGL9 310 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 KCNG3Q8TAE7 436 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 GIMAP1Q8WWP7 306 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 AQP3Q92482 292 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 GPER1Q99527 375 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ZMAT3Q9HA38 289 aaKnown RBP8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ING3Q9NXR8 418 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 SPRR3Q9UBC9 169 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 UPB1Q9UBR1 384 aa8.37□□□□□ -1.07
TRIM55-201ENST00000276573 ELF5Q9UKW6 265 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-201ENST00000276573 DHRS7CA6NNS2 312 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF587BE7ETH6 402 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 SCGNO76038 276 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 NDUFB6O95139 128 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 CD3DP04234 171 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 CHRM2P08172 466 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 UBBP0CG47 229 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 SDHBP21912 280 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 STOMP27105 288 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 VEGFCP49767 419 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 FOXG1P55316 489 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-201ENST00000276573 ACTBP60709 375 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 ACTG1P63261 375 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 MAB21L1Q13394 359 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 RTP5Q14D33 572 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 KISS1Q15726 138 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 DMRTC1Q5HYR2 192 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 PABPC1L2AQ5JQF8 200 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 STEAP1BQ6NZ63 245 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF782Q6ZMW2 699 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-201ENST00000276573 NOXA1Q86UR1 476 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 LIX1LQ8IVB5 337 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 GABRG1Q8N1C3 465 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 CHST4Q8NCG5 386 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 CPEB3Q8NE35 698 aaKnown RBP8.36□□□□□ -1.07
TRIM55-201ENST00000276573 BEST4Q8NFU0 473 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 SEMA6DQ8NFY4 1073 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 OR4D10Q8NGI6 311 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 OR10R2Q8NGX6 335 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 APH1AQ96BI3 265 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 REEP6Q96HR9 211 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 NUDT16L1Q9BRJ7 211 aaKnown RBP8.36□□□□□ -1.07
TRIM55-201ENST00000276573 CHST5Q9GZS9 411 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 IRF2BPLQ9H1B7 796 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 LPAR5Q9H1C0 372 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 BEX1Q9HBH7 125 aa8.36□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF107Q9UII5 783 aaPredicted RBP8.36□□□□□ -1.07
TRIM55-201ENST00000276573 TMEM235A6NFC5 223 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 ARPC1BO15143 372 aaKnown RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 PRAF2O60831 178 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 TGM6O95932 706 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 HPXP02790 462 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 FCER2P06734 321 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 NAT2P11245 290 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 ACKR3P25106 362 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 PTGFRP43088 359 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 ALDH3B1P43353 468 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 MECP2P51608 486 aaKnown RBP8.35□□□□□ -1.07
TRIM55-201ENST00000276573 TAS2R19P59542 299 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 PMP22Q01453 160 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 RIPPLY1Q0D2K3 151 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 CLN3Q13286 438 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 TNK1Q13470 666 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 CAMK2BQ13554 666 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 DEFB109BQ30KR1 87 aa8.35□□□□□ -1.07
TRIM55-201ENST00000276573 C9orf135Q5VTT2 229 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms