RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 XRCC2O43543 280 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 NDUFA7O95182 113 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 IGHV1-69P01742 117 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 FMO3P31513 532 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 ELF3P78545 371 aaPredicted RBP12.61□□□□□ -0.39
SOD1-201ENST00000270142 MZT1Q08AG7 82 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 PPP1R8Q12972 351 aaKnown RBP12.61□□□□□ -0.39
SOD1-201ENST00000270142 PDCD1Q15116 288 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 WDR86Q86TI4 376 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 TSSK6Q9BXA6 273 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 NMNAT2Q9BZQ4 307 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 TRIM15Q9C019 465 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 C14orf119Q9NWQ9 140 aa12.61□□□□□ -0.39
SOD1-201ENST00000270142 PDP1Q9P0J1 537 aaPredicted RBP12.61□□□□□ -0.39
SOD1-201ENST00000270142 A0A0U1RQK1 487 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 CLPSL1A2RUU4 121 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 ANKRD30BLA7E2S9 258 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 TBX1O43435 398 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 CCNB2O95067 398 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 SOX14O95416 240 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 SPI1P17947 270 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 ATP6V1B2P21281 511 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 CX3CR1P49238 355 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 SLC25A1P53007 311 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 KRTAP10-3P60369 221 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 FAM3AP98173 230 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 TEX30Q5JUR7 227 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 BRICD5Q6PL45 260 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 CYP2R1Q6VVX0 501 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 SLC16A9Q7RTY1 509 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 PDZD9Q8IXQ8 264 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 DEFB107AQ8IZN7 70 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 LINC00471Q8N535 108 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 AQP11Q8NBQ7 271 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 OR6K6Q8NGW6 343 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 OR8S1Q8NH09 359 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 ST8SIA4Q92187 359 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 CITED1Q99966 193 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 PPP1R3EQ9H7J1 279 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 ARL8BQ9NVJ2 186 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 ARMC1Q9NVT9 282 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 KAAG1Q9UBP8 84 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 TAGLN3Q9UI15 199 aa12.6□□□□□ -0.39
SOD1-201ENST00000270142 PRKDCP78527 4128 aaKnown RBP12.59□□□□□ -0.39
SOD1-201ENST00000270142 hCG_38984A0A1B0GV85 526 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 DHRS12A0PJE2 317 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 ECDO95905 644 aaPredicted RBP12.59□□□□□ -0.39
SOD1-201ENST00000270142 IGHV4-59P01825 116 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 ANXA2P07355 339 aaKnown RBP12.59□□□□□ -0.39
SOD1-201ENST00000270142 DDOSTP39656 456 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 MAGEA2P43356 314 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 GRB2P62993 217 aaKnown RBP12.59□□□□□ -0.39
SOD1-201ENST00000270142 CSNK2BP67870 215 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 EIF2B1Q14232 305 aaKnown RBP12.59□□□□□ -0.39
SOD1-201ENST00000270142 TIGD6Q17RP2 521 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 MIDNQ504T8 468 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 KLHL12Q53G59 568 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 LINC01590Q5TEZ4 76 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 C16orf89Q6UX73 402 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 LDLRAD3Q86YD5 345 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 SCCPDHQ8NBX0 429 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 OR2T33Q8NG76 320 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 OR1M1Q8NGA1 313 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 TBC1D15Q8TC07 691 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 LRRC29Q8WV35 223 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 DYRK2Q92630 601 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 SGK3Q96BR1 496 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 SEH1LQ96EE3 360 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 REEP6Q96HR9 211 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 CNTD2Q9H8S5 307 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 RNPEPL1Q9HAU8 725 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 VNN3Q9NY84 501 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 RPUSD1Q9UJJ7 312 aaKnown RBP12.59□□□□□ -0.39
SOD1-201ENST00000270142 BAIAP2Q9UQB8 552 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 PKD1L1Q8TDX9 2849 aa12.59□□□□□ -0.39
SOD1-201ENST00000270142 GPR137BO60478 399 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 HSD11B1P28845 292 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 GRK5P34947 590 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 RPL15P61313 204 aaKnown RBP12.58□□□□□ -0.4
SOD1-201ENST00000270142 OCLNQ16625 522 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 MICBQ29980 383 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 C11orf91Q3C1V1 193 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 CDONQ4KMG0 1287 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 WDR38Q5JTN6 314 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 WDR82Q6UXN9 313 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 RHOUQ7L0Q8 258 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 PRSS45Q7RTY3 260 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 DPY19L4Q7Z388 723 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 VMO1Q7Z5L0 202 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 PIP4P2Q8N4L2 257 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 FAM216BQ8N7L0 139 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 OR6N2Q8NGY6 317 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 CCL13Q99616 98 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 TOR3AQ9H497 397 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 DNAJC27Q9NZQ0 273 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 KPTNQ9Y664 436 aa12.58□□□□□ -0.4
SOD1-201ENST00000270142 TCRBV5S2A0A599 114 aa12.57□□□□□ -0.4
SOD1-201ENST00000270142 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms