RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TMEM230Q96A57 120 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 NOL4LQ96MY1 436 aaPredicted RBP7.82□□□□□ -1.16
VAPB-201ENST00000265619 ABHD14AQ9BUJ0 271 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 SEC16AO15027 2179 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 TRBV5-5A0A0J9YX44 114 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 S100A7P31151 101 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 DCAF7P61962 342 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 ENPP2Q13822 863 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 DCAF10Q5QP82 559 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 PRSS54Q6PEW0 395 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 LRRC69Q6ZNQ3 347 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 PTCHD1Q96NR3 888 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 PRAP1Q96NZ9 151 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 SYT3Q9BQG1 590 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 NMES1Q9C002 83 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 KCNJ16Q9NPI9 418 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 MBNL1Q9NR56 388 aaKnown RBP7.82□□□□□ -1.16
VAPB-201ENST00000265619 C19orf12Q9NSK7 152 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 MRPL22Q9NWU5 206 aaKnown RBP7.82□□□□□ -1.16
VAPB-201ENST00000265619 PPIAL4AQ9Y536 164 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 MRPS18BQ9Y676 258 aaKnown RBP7.82□□□□□ -1.16
VAPB-201ENST00000265619 A0A1W2PQU0 124 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 H3BQ15 152 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
VAPB-201ENST00000265619 ACTBP60709 375 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 ACTG1P63261 375 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 RAB35Q15286 201 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 HMGN3Q15651 99 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 PCK2Q16822 640 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 DNLZQ5SXM8 178 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 NRSN1Q8IZ57 195 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 CSNK1A1LQ8N752 337 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 NUP43Q8NFH3 380 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 SLC41A2Q96JW4 573 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 OR2M4Q96R27 311 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 AMELYQ99218 206 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 WFDC1Q9HC57 220 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 CALML5Q9NZT1 146 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 TAC3Q9UHF0 121 aa7.82□□□□□ -1.16
VAPB-201ENST00000265619 A0A1W2PR48 441 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 ADAM10O14672 748 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 RCBTB2O95199 551 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 PNLIPP16233 465 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 SERPINA2P20848 420 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 SLC25A1P53007 311 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 HIST2H3PS2Q5TEC6 136 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 ZNF774Q6NX45 483 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 Q6ZS52 159 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 KDM8Q8N371 416 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 OR9K2Q8NGE7 335 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 OR51A2Q8NGJ7 313 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 M1APQ8TC57 530 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 RNF128Q8TEB7 428 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 PARD6GQ9BYG4 376 aaPredicted RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 SLC35B3Q9H1N7 401 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 SPAG17Q6Q759 2223 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 ELOA3CA0A087WX78 387 aaPredicted RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 TRBV5-7A0A0A0MS05 114 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 M0R143 59 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 OR5H8P0DN80 308 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 IRF2P14316 349 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 IGFALSP35858 605 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 KIR3DL2P43630 455 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 RPL29P47914 159 aaKnown RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 SUPT4H1P63272 117 aaKnown RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 ADAM8P78325 824 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 DLK1P80370 383 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 PMPCAQ10713 525 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 SRSF5Q13243 272 aaKnown RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 SQSTM1Q13501 440 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 GAB4Q2WGN9 574 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 FJX1Q86VR8 437 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 GJD3Q8N144 294 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 NPEPL1Q8NDH3 523 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 SLC2A12Q8TD20 617 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 C15orf40Q8WUR7 153 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 DHRS7CA6NNS2 312 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 C2CD4DB7Z1M9 353 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 CD1AP06126 327 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 CD37P11049 281 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 FUT3P21217 361 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 MRPL2Q5T653 305 aaKnown RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 FAM160A2Q8N612 972 aaPredicted RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 OR5AR1Q8NGP9 310 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 FOXN4Q96NZ1 517 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 CDV3Q9UKY7 258 aaKnown RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 SRPK3Q9UPE1 567 aa7.81□□□□□ -1.16
VAPB-201ENST00000265619 ARHGEF17Q96PE2 2063 aaPredicted RBP7.81□□□□□ -1.16
VAPB-201ENST00000265619 LOC100289279A0A1B0GTE1 492 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ELOA3DA6NLF2 546 aaPredicted RBP7.8□□□□□ -1.16
VAPB-201ENST00000265619 HSBP1L1C9JCN9 74 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 GIMD1P0DJR0 217 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 LYL1P12980 280 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ZNF708P17019 499 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 HTR2CP28335 458 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 CEACAM8P31997 349 aaPredicted RBP7.8□□□□□ -1.16
VAPB-201ENST00000265619 CCKBRP32239 447 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 ASCL1P50553 236 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 UCP2P55851 309 aa7.8□□□□□ -1.16
VAPB-201ENST00000265619 TMEM33P57088 247 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms