RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 VSTM5A8MXK1 200 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 PHYHO14832 338 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 PNPP00491 289 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 EIF2B2P49770 351 aaKnown RBP15.68■□□□□ 0.1
SDF4-201ENST00000263741 RIDAP52758 137 aaKnown RBP15.68■□□□□ 0.1
SDF4-201ENST00000263741 ZNF92Q03936 586 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 GK2Q14410 553 aaPredicted RBP15.68■□□□□ 0.1
SDF4-201ENST00000263741 NKPD1Q17RQ9 610 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 MBNL2Q5VZF2 373 aaKnown RBP15.68■□□□□ 0.1
SDF4-201ENST00000263741 RHOUQ7L0Q8 258 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 YIPF7Q8N8F6 280 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 PPP1R14AQ96A00 147 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 VRK1Q99986 396 aaPredicted RBP15.68■□□□□ 0.1
SDF4-201ENST00000263741 ACOXLQ9NUZ1 547 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 GNG8Q9UK08 70 aa15.68■□□□□ 0.1
SDF4-201ENST00000263741 M0R233 179 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 LILRA1O75019 489 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 UPK1BO75841 260 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 KRT8P05787 483 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 GADD45AP24522 165 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 ACTC1P68032 377 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 ACTA1P68133 377 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 EGR3Q06889 387 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 RAB40BQ12829 278 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 OR2T2Q6IF00 324 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 ACBD7Q8N6N7 88 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 OR8B12Q8NGG6 310 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 SNX33Q8WV41 574 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 NINJ1Q92982 152 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 PGAM5Q96HS1 289 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 FAM206AQ9NX38 181 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 CNOT2Q9NZN8 540 aaKnown RBP15.67■□□□□ 0.1
SDF4-201ENST00000263741 CREBBPQ92793 2442 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 CELSR1Q9NYQ6 3014 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 TIMM8AO60220 97 aaPredicted RBP15.67■□□□□ 0.1
SDF4-201ENST00000263741 PSMB10P40306 273 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 PTH2RP49190 550 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 ZNF684Q5T5D7 378 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 OR5L1Q8NGL2 311 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 SORCS2Q96PQ0 1159 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 C6orf62Q9GZU0 229 aaPredicted RBP15.67■□□□□ 0.1
SDF4-201ENST00000263741 MSL2Q9HCI7 577 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 ITPR3Q14573 2671 aa15.67■□□□□ 0.1
SDF4-201ENST00000263741 TMEM269A0A1B0GVZ9 245 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 IGHV3-13P01766 116 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 IGHA1P01876 353 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 C21orf33P30042 268 aaPredicted RBP15.66■□□□□ 0.1
SDF4-201ENST00000263741 SOX6P35712 828 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 OR12D2P58182 307 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 ZNF45Q02386 682 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 DEGS2Q6QHC5 323 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 MRPL21Q7Z2W9 205 aaKnown RBP15.66■□□□□ 0.1
SDF4-201ENST00000263741 SOX7Q9BT81 388 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 ALG8Q9BVK2 526 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 MRPS18AQ9NVS2 196 aaKnown RBP15.66■□□□□ 0.1
SDF4-201ENST00000263741 PURGQ9UJV8 347 aaKnown RBP15.66■□□□□ 0.1
SDF4-201ENST00000263741 EDARQ9UNE0 448 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 ZSCAN5BA6NJL1 495 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 J3QW42 95 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 ZNF254O75437 659 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 SRSF10O75494 262 aaKnown RBP15.66■□□□□ 0.1
SDF4-201ENST00000263741 ATP5J2P56134 94 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 SELENOVP59797 346 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 IFITM3Q01628 133 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 MALLQ13021 153 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 LIPNQ5VXI9 398 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 FBXW12Q6X9E4 464 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 ZNF649Q9BS31 505 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 ISG20L2Q9H9L3 353 aaKnown RBP15.66■□□□□ 0.1
SDF4-201ENST00000263741 ERVK13-1Q9NX77 482 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 PEX16Q9Y5Y5 336 aa15.66■□□□□ 0.1
SDF4-201ENST00000263741 PNMA8CA0A1B0GUJ8 204 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 IGHV4-39P01824 125 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 ART1P52961 327 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 ST3GAL4Q11206 333 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 KLHL22Q53GT1 634 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 ARMCX4Q5H9R4 360 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 PGAP1Q75T13 922 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 SGK3Q96BR1 496 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 MBD6Q96DN6 1003 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 REEP6Q96HR9 211 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 C4orf36Q96KX1 117 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 NXF2Q9GZY0 626 aaKnown RBP15.65■□□□□ 0.1
SDF4-201ENST00000263741 NIPAL2Q9H841 368 aa15.65■□□□□ 0.1
SDF4-201ENST00000263741 FGF20Q9NP95 211 aaPredicted RBP15.65■□□□□ 0.1
SDF4-201ENST00000263741 BEX4Q9NWD9 120 aaPredicted RBP15.65■□□□□ 0.1
SDF4-201ENST00000263741 LOC100506127A0A0U1RQW1 187 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 LOC110117498-PIK3R3F6TDL0 507 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 H3BSH0 61 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 J3QLW9 94 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 APOC1P02654 83 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 LIMS3P0CW19 117 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 LIMS4P0CW20 117 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 RAC2P15153 192 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 ZNF19P17023 458 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 EVX1P49640 407 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 ETV1P50549 477 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 MMP15P51511 669 aa15.64■□□□□ 0.09
SDF4-201ENST00000263741 HNRNPA0Q13151 305 aaKnown RBP15.64■□□□□ 0.09
SDF4-201ENST00000263741 ODF4Q2M2E3 257 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms