RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 SARAFQ96BY9 339 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 CHST5Q9GZS9 411 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 NOX3Q9HBY0 568 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 RAB22AQ9UL26 194 aa13.76□□□□□ -0.21
VPS26A-201ENST00000263559 LOC100509620A0A075B734 347 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 SS18L1O75177 396 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-201ENST00000263559 IL18BPO95998 194 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 CD79AP11912 226 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 RAB6AP20340 208 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 OR3A4PP47883 348 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 OR3A2P47893 321 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 MOGAT2Q3SYC2 334 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 Q6ZS92 163 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 GCNT2Q8N0V5 402 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 SEMA6DQ8NFY4 1073 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 NPRL2Q8WTW4 380 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 FAM46BQ96A09 425 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 C10orf35Q96D05 121 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 C7orf50Q9BRJ6 194 aaKnown RBP13.75□□□□□ -0.21
VPS26A-201ENST00000263559 SPENQ96T58 3664 aaKnown RBP13.75□□□□□ -0.21
VPS26A-201ENST00000263559 ECDO95905 644 aaPredicted RBP13.75□□□□□ -0.21
VPS26A-201ENST00000263559 PRF1P14222 555 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 GIFP27352 417 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 MPGP29372 298 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 GUCA2AQ02747 115 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 TNK1Q13470 666 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 CRIP3Q6Q6R5 217 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 GLIPR1L1Q6UWM5 242 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 UTS2BQ765I0 119 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 GLRX2Q9NS18 164 aa13.75□□□□□ -0.21
VPS26A-201ENST00000263559 MRPS28Q9Y2Q9 187 aaKnown RBP13.75□□□□□ -0.21
VPS26A-201ENST00000263559 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
VPS26A-201ENST00000263559 CCR6P51684 374 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 RAB1AP62820 205 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 AKAP14Q86UN6 197 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 GPER1Q99527 375 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 C1QTNF5Q9BXJ0 243 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 DPAGT1Q9H3H5 408 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 HRASLSQ9HDD0 168 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 NPAP1Q9NZP6 1156 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 ATPIF1Q9UII2 106 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 MGAQ8IWI9 3026 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 ANKRD20A5PA0PJZ0 165 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 INMT-MINDY4F8WBC2 141 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 CCL2P13500 99 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 EDN3P14138 238 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 RAB25P57735 213 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 ZNF92Q03936 586 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 KISS1Q15726 138 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 TATDN3Q17R31 274 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 HIKESHIQ53FT3 197 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 FGD2Q7Z6J4 655 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 ZNF101Q8IZC7 436 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 RBMXL3Q8N7X1 1067 aaKnown RBP13.74□□□□□ -0.21
VPS26A-201ENST00000263559 ACBD4Q8NC06 268 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 OR1K1Q8NGR3 316 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 C1orf147Q96MC9 270 aaPredicted RBP13.74□□□□□ -0.21
VPS26A-201ENST00000263559 CACNG6Q9BXT2 260 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 SSUH2Q9Y2M2 353 aa13.74□□□□□ -0.21
VPS26A-201ENST00000263559 TMEM14DPA8MWL7 114 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 H7C417 338 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 RBBP9O75884 186 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 ALX3O95076 343 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 CCNOP22674 350 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 PRSS3P35030 304 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 AP3S2P59780 193 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 RIPPLY1Q0D2K3 151 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 TMEM255AQ5JRV8 349 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 ZMAT3Q9HA38 289 aaKnown RBP13.73□□□□□ -0.21
VPS26A-201ENST00000263559 MTFP1Q9UDX5 166 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 WASF3Q9UPY6 502 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 GTF3C1Q12789 2109 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 METTL21EPA6NDL7 271 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 DHRS7CA6NNS2 312 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 GMDSO60547 372 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 TCRBP04435 133 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 GSTT2BP0CG30 244 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 ARR3P36575 388 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 UBASH3BQ8TF42 649 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 BCL2L2Q92843 193 aaPredicted RBP13.73□□□□□ -0.21
VPS26A-201ENST00000263559 RNF170Q96K19 258 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 GPR173Q9NS66 373 aa13.73□□□□□ -0.21
VPS26A-201ENST00000263559 A0A0A6YYH2 397 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 C5orf49A4QMS7 147 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 MEIS3P1A6NDR6 274 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 WIPF3A6NGB9 483 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 A6NJ64 397 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 RAB27BO00194 218 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 COX5BP10606 129 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 STOMP27105 288 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 GSK3AP49840 483 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 FAM3AP98173 230 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 FAM214BQ7L5A3 538 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 TMEM104Q8NE00 496 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 OR5D18Q8NGL1 313 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 PIGTQ969N2 578 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 RGCCQ9H4X1 137 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 NUDT15Q9NV35 164 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms