RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 C1QL3Q5VWW1 255 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 FAM160A2Q8N612 972 aaPredicted RBP13.32□□□□□ -0.28
XRCC1-201ENST00000262887 FGGYQ96C11 551 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 ASB16Q96NS5 453 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 G6PC2Q9NQR9 355 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 PISDQ9UG56 409 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 CXorf65A6NEN9 183 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 CLDN4O14493 209 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 SRSF10O75494 262 aaKnown RBP13.32□□□□□ -0.28
XRCC1-201ENST00000262887 MPZL1O95297 269 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 BPNT1O95861 308 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 GAPDHP04406 335 aaKnown RBP13.32□□□□□ -0.28
XRCC1-201ENST00000262887 SFTPBP07988 381 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 RPL12P30050 165 aaKnown RBP13.32□□□□□ -0.28
XRCC1-201ENST00000262887 PCP4P48539 62 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 CLDN6P56747 220 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 QRFPP83859 136 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 ZNF239Q16600 458 aaKnown RBP13.32□□□□□ -0.28
XRCC1-201ENST00000262887 LBHQ53QV2 105 aaPredicted RBP13.32□□□□□ -0.28
XRCC1-201ENST00000262887 DPPA2Q7Z7J5 298 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 FBXL17Q9UF56 701 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 TMEM269A0A1B0GVZ9 245 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 BTBD17A6NE02 478 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 CEACAM18A8MTB9 384 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 CTSBP07858 339 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 CXCR1P25024 350 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 MAS1LP35410 378 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 FAM3AP98173 230 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 VAX1Q5SQQ9 334 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 PTCRAQ6ISU1 281 aaPredicted RBP13.31□□□□□ -0.28
XRCC1-201ENST00000262887 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 HIST2H3AQ71DI3 136 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 COX15Q7KZN9 410 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 RTL10Q7L3V2 364 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.31□□□□□ -0.28
XRCC1-201ENST00000262887 CD300LFQ8TDQ1 290 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 S100PBPQ96BU1 408 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 SCGB3A2Q96PL1 93 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 CHST5Q9GZS9 411 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 FAM212BQ9NTI7 297 aaPredicted RBP13.31□□□□□ -0.28
XRCC1-201ENST00000262887 K7EPK0 472 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 NME2P1O60361 137 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 IFNA10P01566 189 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 BGLAPP02818 100 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 FPR2P25090 351 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 FCGR2CP31995 323 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 RAB1AP62820 205 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 GLO1Q04760 184 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 OPN5Q6U736 354 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 NUP54Q7Z3B4 507 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 SLC22A24Q8N4F4 322 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 FAM71E2Q8N5Q1 922 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 ZNF519Q8TB69 540 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 RTBDNQ9BSG5 229 aaPredicted RBP13.31□□□□□ -0.28
XRCC1-201ENST00000262887 NICN1Q9BSH3 213 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 SOX7Q9BT81 388 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 SCRT1Q9BWW7 348 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 PTGES2Q9H7Z7 377 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 SLC2A4RGQ9NR83 387 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 PRTFDC1Q9NRG1 225 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 PIAS3Q9Y6X2 628 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 LOC101059948A0A1B0GTJ6 334 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 IFITM10A6NMD0 228 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 GNRH1P01148 92 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 ACRP10323 421 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 HSD11B1P28845 292 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 EMP2P54851 167 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 ZNF616Q08AN1 781 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 ACTBL2Q562R1 376 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 ZNF101Q8IZC7 436 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 SMIM3Q9BZL3 60 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 TGIF2Q9GZN2 237 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 HRASLS2Q9NWW9 162 aa13.31□□□□□ -0.28
XRCC1-201ENST00000262887 GAR1Q9NY12 217 aaKnown RBP13.31□□□□□ -0.28
XRCC1-201ENST00000262887 COA3Q9Y2R0 106 aaPredicted RBP13.31□□□□□ -0.28
XRCC1-201ENST00000262887 A0A0J9YY10 115 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 RNH1P13489 461 aaKnown RBP13.3□□□□□ -0.28
XRCC1-201ENST00000262887 ZNF708P17019 499 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 DDTP30046 118 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 HEPN1Q6WQI6 88 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 DCXRQ7Z4W1 244 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 TGIF2LXQ8IUE1 241 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 MISP3Q96FF7 219 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 NUDT16L1Q9BRJ7 211 aaKnown RBP13.3□□□□□ -0.28
XRCC1-201ENST00000262887 CNTNAP3Q9BZ76 1288 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 VSX1Q9NZR4 365 aaPredicted RBP13.3□□□□□ -0.28
XRCC1-201ENST00000262887 TBX21Q9UL17 535 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 LTBP2Q14767 1821 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 TRAV36DV7A0A075B6V5 113 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 H0Y8X5 98 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 ZNF217O75362 1048 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 OR2C1O95371 312 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 HIST1H1BP16401 226 aaKnown RBP13.3□□□□□ -0.28
XRCC1-201ENST00000262887 THBS4P35443 961 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 RPS10P46783 165 aaKnown RBP13.3□□□□□ -0.28
XRCC1-201ENST00000262887 UCP2P55851 309 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 TMEM33P57088 247 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 SPEM2Q0P670 501 aa13.3□□□□□ -0.28
XRCC1-201ENST00000262887 CLINT1Q14677 625 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms