RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 NTMQ9P121 344 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 HS3ST3B1Q9Y662 390 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 CD300LDQ6UXZ3 194 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 H2BFWTQ7Z2G1 175 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 OR6K3Q8NGY3 331 aa12.43□□□□□ -0.42
CDH1-201ENST00000261769 NAA50Q9GZZ1 169 aaKnown RBP12.43□□□□□ -0.42
CDH1-201ENST00000261769 CRYBA1P05813 215 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 RAP2BP61225 183 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 LSM6P62312 80 aaKnown RBP12.42□□□□□ -0.42
CDH1-201ENST00000261769 PRAMEF5Q5TYX0 476 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 PRAMEF6Q5VXH4 476 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 RBMXL3Q8N7X1 1067 aaKnown RBP12.42□□□□□ -0.42
CDH1-201ENST00000261769 ZNF416Q9BWM5 594 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CCL27Q9Y4X3 112 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 I3L521 148 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CCR9P51686 369 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 SKP2Q13309 424 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 C3AR1Q16581 482 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 OTPQ5XKR4 325 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 PDZD9Q8IXQ8 264 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CES1P1Q9UKY3 287 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 C17orf112F2Z3M2 114 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 ADH4P08319 380 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CT45A6P0DMU7 189 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CT45A5P0DMU8 189 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CT45A7P0DMV0 189 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 GPM6AP51674 278 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 TMEM52Q8NDY8 209 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 MOGAT1Q96PD6 335 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 MS4A5Q9H3V2 200 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 FBXL2Q9UKC9 423 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CHST2Q9Y4C5 530 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 NUP214P35658 2090 aaPredicted RBP12.42□□□□□ -0.42
CDH1-201ENST00000261769 MGMTP16455 207 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 SRP14P37108 136 aaKnown RBP12.42□□□□□ -0.42
CDH1-201ENST00000261769 CDK5Q00535 292 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 ADGRG3Q86Y34 549 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 TMEM171Q8WVE6 324 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 ST8SIA4Q92187 359 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CCL17Q92583 94 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 FCRL1Q96LA6 429 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 TAAR3PQ9P1P4 343 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 FOXJ3Q9UPW0 622 aa12.42□□□□□ -0.42
CDH1-201ENST00000261769 CEP250Q9BV73 2442 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 A6NHS1 94 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 IFITM5A6NNB3 132 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 AKR1D1P51857 326 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 STAC2Q6ZMT1 411 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 SLC25A46Q96AG3 418 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 SLC23A1Q9UHI7 598 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 MRPS18BQ9Y676 258 aaKnown RBP12.41□□□□□ -0.42
CDH1-201ENST00000261769 OR5B21A6NL26 309 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 DHRS3O75911 302 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 TAS2R30P59541 319 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 PHLDA2Q53GA4 152 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 FBXW9Q5XUX1 488 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 INO80CQ6PI98 192 aaPredicted RBP12.41□□□□□ -0.42
CDH1-201ENST00000261769 OR5B12Q96R08 314 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 DPCDQ9BVM2 203 aaPredicted RBP12.41□□□□□ -0.42
CDH1-201ENST00000261769 RBFOX1Q9NWB1 397 aaKnown RBP12.41□□□□□ -0.42
CDH1-201ENST00000261769 MPC1Q9Y5U8 109 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 TUBGCP6Q96RT7 1819 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 IGKV1-8A0A0C4DH67 115 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 TMEM30CPA0ZSE6 113 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 M0QYG6 137 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 HSD17B6O14756 317 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 TPT1P13693 172 aaKnown RBP12.41□□□□□ -0.42
CDH1-201ENST00000261769 OR6S1Q8NH40 331 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 OR51H1Q8NH63 302 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 SLC39A7Q92504 469 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 OR2B2Q9GZK3 357 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 CACFD1Q9UGQ2 172 aa12.41□□□□□ -0.42
CDH1-201ENST00000261769 ERRFI1Q9UJM3 462 aaPredicted RBP12.41□□□□□ -0.42
CDH1-201ENST00000261769 WISP3O95389 354 aaPredicted RBP12.4□□□□□ -0.42
CDH1-201ENST00000261769 TMEM251Q8N6I4 163 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 ANGPTL4Q9BY76 406 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 DLL4Q9NR61 685 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 A0A1W2PS29 197 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 OR6C68A6NDL8 312 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 K7EPK0 472 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 ATXN7O15265 892 aaPredicted RBP12.4□□□□□ -0.42
CDH1-201ENST00000261769 CDC14BO60729 498 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 IFI6P09912 130 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 DESI1Q6ICB0 168 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 FAM71E2Q8N5Q1 922 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 C4orf45Q96LM5 186 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 ST8SIA5O15466 376 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 COX6B1P14854 86 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 TBPP20226 339 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 FUT3P21217 361 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 CA6P23280 308 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 ARL3P36405 182 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 RPS19P39019 145 aaKnown RBP12.4□□□□□ -0.42
CDH1-201ENST00000261769 NPY4RP50391 375 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 SHEQ5VZ18 495 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 OR52W1Q6IF63 320 aa12.4□□□□□ -0.42
CDH1-201ENST00000261769 TSNAXQ99598 290 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms