RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 HTR5AP47898 357 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 BLVRAP53004 296 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 TRIQKQ629K1 86 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 MZT2BQ6NZ67 158 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 CORO6Q6QEF8 472 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 SPNS3Q6ZMD2 512 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 OR2AJ1Q8NGZ0 328 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 BCL2L14Q9BZR8 327 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 OR51B6Q9H340 312 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 PLK3Q9H4B4 646 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 KCNG2Q9UJ96 466 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 SYNGR3O43761 229 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 HLA-DQB1P01920 261 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 HLA-DPB1P04440 258 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 CFL1P23528 166 aaKnown RBP14.41□□□□□ -0.1
SDCBP-201ENST00000260130 HLA-DMAP28067 261 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 ATP5J2P56134 94 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 ADAM8P78325 824 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 LINC01590Q5TEZ4 76 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 THOC7Q6I9Y2 204 aaKnown RBP14.41□□□□□ -0.1
SDCBP-201ENST00000260130 SLC18B1Q6NT16 456 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 PLBD1Q6P4A8 553 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 MZT2AQ6P582 158 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 LYPD4Q6UWN0 246 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 NOXA1Q86UR1 476 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 LINC00346Q8IVM7 164 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 ZNF511Q8NB15 262 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 OR6K6Q8NGW6 343 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 OR1F12Q8NHA8 337 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 SLA2Q9H6Q3 261 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 COMMD3Q9UBI1 195 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 OR6C6A6NF89 314 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 FAM25AB3EWG3 89 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 FAM25CB3EWG5 89 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 FAM25GB3EWG6 89 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 SLC2A2P11168 524 aaPredicted RBP14.41□□□□□ -0.1
SDCBP-201ENST00000260130 WNT5AP41221 380 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 SNRPD2P62316 118 aaKnown RBP14.41□□□□□ -0.1
SDCBP-201ENST00000260130 ACSM1Q08AH1 577 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 RAB35Q15286 201 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 MSMPQ1L6U9 139 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 PLET1Q6UQ28 207 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 UNQ6126/PRO20091Q6UXV3 157 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 UTS2BQ765I0 119 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 CPOQ8IVL8 374 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 KLHL36Q8N4N3 616 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 ZNF485Q8NCK3 441 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 MRPL24Q96A35 216 aaKnown RBP14.41□□□□□ -0.1
SDCBP-201ENST00000260130 OR51V1Q9H2C8 321 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 WDR76Q9H967 626 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 ADAM30Q9UKF2 790 aa14.41□□□□□ -0.1
SDCBP-201ENST00000260130 PLA2G10O15496 165 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 GLCEO94923 617 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 MAP2K3P46734 347 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 ELFN2Q5R3F8 820 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 SHEQ5VZ18 495 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 RGS7BPQ6MZT1 257 aaPredicted RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 ARL9Q6T311 187 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 ZNF101Q8IZC7 436 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 Q8N402 240 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 C4orf45Q96LM5 186 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 SOSTQ9BQB4 213 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 TMEM246Q9BRR3 403 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 HDHD2Q9H0R4 259 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 HINT3Q9NQE9 182 aaKnown RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 NUFIP1Q9UHK0 495 aaKnown RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 ATPIF1Q9UII2 106 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 GDF2Q9UK05 429 aaPredicted RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 PRRC2AP48634 2157 aaKnown RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 USF3Q68DE3 2245 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 H7C417 338 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 ICMTO60725 284 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 EVX1P49640 407 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 CNIH2Q6PI25 160 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 PRSS57Q6UWY2 283 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 CFAP77Q6ZQR2 320 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 LHFPL3Q86UP9 236 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 OR1J1Q8NGS3 322 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 OR52N1Q8NH53 320 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 UBASH3BQ8TF42 649 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 RNF170Q96K19 258 aa14.4□□□□□ -0.1
SDCBP-201ENST00000260130 MRPL37Q9BZE1 423 aaKnown RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 RANGRFQ9HD47 186 aaPredicted RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 FBXO9Q9UK97 447 aaPredicted RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 EXOGQ9Y2C4 368 aaKnown RBP14.4□□□□□ -0.1
SDCBP-201ENST00000260130 CELSR1Q9NYQ6 3014 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 SMIM30A4D0T7 59 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 RPS27P42677 84 aaKnown RBP14.39□□□□□ -0.11
SDCBP-201ENST00000260130 ERVS71-1P61550 626 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 PCK2Q16822 640 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 TEX30Q5JUR7 227 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 Q5PR19 223 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 CXXC5Q7LFL8 322 aaKnown RBP14.39□□□□□ -0.11
SDCBP-201ENST00000260130 SHFQ7M4L6 423 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 KRTAP1-3Q8IUG1 177 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 C1orf174Q8IYL3 243 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 PPP1R3EQ9H7J1 279 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 ELOVL3Q9HB03 270 aa14.39□□□□□ -0.11
SDCBP-201ENST00000260130 RBFOX1Q9NWB1 397 aaKnown RBP14.39□□□□□ -0.11
SDCBP-201ENST00000260130 DUSP13Q9UII6 198 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms