RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 GFOD2Q3B7J2 385 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 VWA1Q6PCB0 445 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 LRRC28Q86X40 367 aaPredicted RBP15.16■□□□□ 0.02
SRSF1-201ENST00000258962 COMMD2Q86X83 199 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 OR8H2Q8N162 312 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 PLPP7Q8NBV4 271 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 BCL2L2Q92843 193 aaPredicted RBP15.16■□□□□ 0.02
SRSF1-201ENST00000258962 FAM71F1Q96KD3 344 aaPredicted RBP15.16■□□□□ 0.02
SRSF1-201ENST00000258962 CYSLTR2Q9NS75 346 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 CKLFQ9UBR5 152 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 SPATA2Q9UM82 520 aa15.16■□□□□ 0.02
SRSF1-201ENST00000258962 INTS1Q8N201 2190 aaKnown RBP15.15■□□□□ 0.02
SRSF1-201ENST00000258962 A6NIN4 97 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 FAM25AB3EWG3 89 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 FAM25CB3EWG5 89 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 FAM25GB3EWG6 89 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 EEF1E1-BLOC1S5C9J1V9 151 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 C19orf84I3L1E1 186 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 EEF1E1O43324 174 aaKnown RBP15.15■□□□□ 0.02
SRSF1-201ENST00000258962 PTTG1O95997 202 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 CD37P11049 281 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 AZGP1P25311 298 aaKnown RBP15.15■□□□□ 0.02
SRSF1-201ENST00000258962 ASCL1P50553 236 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 SCN1BQ07699 218 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 ZNF787Q6DD87 383 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 ANKRD16Q6P6B7 361 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 Q6ZSR3 168 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 DOK3Q7L591 496 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 CNEP1R1Q8N9A8 125 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 OR6K3Q8NGY3 331 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 OR14K1Q8NGZ2 314 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 ZNF671Q8TAW3 534 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 PPP1R14BQ96C90 147 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 PPP1R3EQ9H7J1 279 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 RNF121Q9H920 327 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 LIN7BQ9HAP6 207 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 FAIMQ9NVQ4 179 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 B3GNT2Q9NY97 397 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 ATPIF1Q9UII2 106 aa15.15■□□□□ 0.02
SRSF1-201ENST00000258962 IGHV1-2P23083 117 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 DDOSTP39656 456 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 TFF3Q07654 80 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 P2RY14Q15391 338 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 HIKESHIQ53FT3 197 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 ZNF529Q6P280 563 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 MEX3BQ6ZN04 569 aaKnown RBP15.14■□□□□ 0.01
SRSF1-201ENST00000258962 SERPINA12Q8IW75 414 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 POC5Q8NA72 575 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 RELL2Q8NC24 303 aaPredicted RBP15.14■□□□□ 0.01
SRSF1-201ENST00000258962 OR4M1Q8NGD0 313 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 SPOCK3Q9BQ16 436 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 PIGMQ9H3S5 423 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 EXTL2Q9UBQ6 330 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 OR5V1Q9UGF6 321 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 PKDREJQ9NTG1 2253 aa15.14■□□□□ 0.01
SRSF1-201ENST00000258962 PFDN1O60925 122 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 TNFSF13O75888 250 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 CALCBP10092 127 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 SPOCK1Q08629 439 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 RIN1Q13671 783 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 PYDC2Q56P42 97 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 STEAP3Q658P3 488 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 FAM166AQ6J272 317 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 BAIAP2L2Q6UXY1 529 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 LYPD6Q86Y78 171 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 OR52H1Q8NGJ2 320 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 MARVELD3Q96A59 401 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 SGK3Q96BR1 496 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 SLC25A38Q96DW6 304 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 NKX3-1Q99801 234 aaPredicted RBP15.13■□□□□ 0.01
SRSF1-201ENST00000258962 OR10A2Q9H208 303 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 NPDC1Q9NQX5 325 aaPredicted RBP15.13■□□□□ 0.01
SRSF1-201ENST00000258962 STEAP1Q9UHE8 339 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 V9GYS6 101 aa15.13■□□□□ 0.01
SRSF1-201ENST00000258962 LOC100509620A0A075B734 347 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 SLC17A2O00624 439 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 COX5BP10606 129 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 CD79AP11912 226 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 ZNF20P17024 532 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 ARR3P36575 388 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 GNALP38405 381 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 RANBP1P43487 201 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 BAK1Q16611 211 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 TBRG1Q3YBR2 411 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 Q6ZT83 130 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 DTX3Q8N9I9 347 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 OR1M1Q8NGA1 313 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 RNASE6Q93091 150 aaKnown RBP15.12■□□□□ 0.01
SRSF1-201ENST00000258962 C14orf119Q9NWQ9 140 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 RHBDD3Q9Y3P4 386 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 LOC390937A0A1W2PQ73 354 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 MEGF11A6BM72 1044 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 UBL3O95164 117 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 CNOT4O95628 575 aaKnown RBP15.12■□□□□ 0.01
SRSF1-201ENST00000258962 LCATP04180 440 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 RAB1AP62820 205 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 FBXL19-AS1Q494R0 122 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 UBE2NLQ5JXB2 153 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 GLT8D1Q68CQ7 371 aa15.12■□□□□ 0.01
SRSF1-201ENST00000258962 TMEM53Q6P2H8 277 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms