RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SNTB1Q13884 538 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF626Q68DY1 528 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 PPP1R32Q7Z5V6 425 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ATG4DQ86TL0 474 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 TUSC5Q8IXB3 177 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ACBD4Q8NC06 268 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 PTDSS2Q9BVG9 487 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 GNB4Q9HAV0 340 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 MICAL3Q7RTP6 2002 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 TMEM200CA6NKL6 621 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 PTTG1O95997 202 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 CALCRP30988 508 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 AKR1C1Q04828 323 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 PRAMEF5Q5TYX0 476 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 PRAMEF6Q5VXH4 476 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 HAGHLQ6PII5 290 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 LRRC29Q8WV35 223 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 KTI12Q96EK9 354 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 FOXJ2Q9P0K8 574 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 S100A9P06702 114 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF32P17041 273 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 PEBP1P30086 187 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 C9orf40Q8IXQ3 194 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 MFSD4AQ8N468 514 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 BHLHE23Q8NDY6 225 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 FOXN4Q96NZ1 517 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 A3GALT2U3KPV4 340 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ARL3P36405 182 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ANKRD13BQ86YJ7 626 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 DEFB108BQ8NET1 73 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 SYNPO2LQ9H987 977 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 SIRPB1O00241 398 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 FUT3P21217 361 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 CAV2P51636 162 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 TRILQ7L0X0 811 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 GLCCI1Q86VQ1 547 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ADGRG3Q86Y34 549 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 OR1L6Q8NGR2 347 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF596Q8TC21 504 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 TMEM45BQ96B21 275 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 RASL12Q9NYN1 266 aa11.95□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF638Q14966 1978 aaKnown RBP11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 ADAM20O43506 726 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 IFNA10P01566 189 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 BLOC1S1P78537 153 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 RTP5Q14D33 572 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 DAZAP1Q96EP5 407 aaKnown RBP11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 SIGLEC11Q96RL6 698 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 BIN3Q9NQY0 253 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 TMEM38BQ9NVV0 291 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 A0A1W2PQL4 384 aaPredicted RBP11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 HPNP05981 417 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 GUCA2AQ02747 115 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 CCL17Q92583 94 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 GPA33Q99795 319 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 FUNDC2Q9BWH2 189 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 LINC00470Q9BZP3 86 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 MYO9BQ13459 2157 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 CD1EP15812 388 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 INPP5JQ15735 1006 aaPredicted RBP11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 RNFT1Q5M7Z0 435 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 NMNAT2Q9BZQ4 307 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 C20orf85Q9H1P6 137 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 SLC52A3Q9NQ40 469 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 IL20Q9NYY1 176 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 F5H5P2 479 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 ATF4P18848 351 aaPredicted RBP11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 CLDN6P56747 220 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 IL13RA1P78552 427 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 PLPPR5Q32ZL2 321 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 HEYLQ9NQ87 328 aaPredicted RBP11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 NDUFB11Q9NX14 153 aa11.94□□□□□ -0.5
PRPF38A-201ENST00000257181 HBE1P02100 147 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 OR8U9P0C7N5 309 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 TAS2R45P59539 299 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 RAP2BP61225 183 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 PRDX4Q13162 271 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 LTC4SQ16873 150 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 GLYATL3Q5SZD4 288 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 MOB3BQ86TA1 216 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 NANOGP1Q8N7R0 232 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 OR8H1Q8NGG4 311 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF431Q8TF32 576 aaPredicted RBP11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 SECTM1Q8WVN6 248 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 ASB13Q8WXK3 278 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 NDFIP1Q9BT67 221 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 CLN8Q9UBY8 286 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF629Q9UEG4 869 aaPredicted RBP11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 TRIP12Q14669 1992 aaPredicted RBP11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 PPIAL4EA0A075B759 164 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 PPIAL4DF5H284 164 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 PPIAL4FP0DN26 164 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 GZMHP20718 246 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 ZNF85Q03923 595 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 AKR7LQ8NHP1 331 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 POM121L2Q96KW2 1035 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 PPIAL4AQ9Y536 164 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 TSPAN2O60636 221 aa11.93□□□□□ -0.5
PRPF38A-201ENST00000257181 FUCA1P04066 466 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms