RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 HLA-DQA2P01906 255 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 FABP3P05413 133 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 GSTP1P09211 210 aaKnown RBP8.51□□□□□ -1.05
VPS50-201ENST00000251739 RRM2P31350 389 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 IFNGR2P38484 337 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 HMGA2P52926 109 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 KRTAP10-3P60369 221 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 TEX30Q5JUR7 227 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 SLC35F1Q5T1Q4 408 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 OLFML2AQ68BL7 652 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 SFRP4Q6FHJ7 346 aaPredicted RBP8.51□□□□□ -1.05
VPS50-201ENST00000251739 RPL13AP3Q6NVV1 102 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 ZNF826PQ6ZT77 177 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 ZDHHC21Q8IVQ6 265 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 C11orf53Q8IXP5 236 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 KIR3DL3Q8N743 410 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 SPERTQ8NA61 448 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 CYB561A3Q8NBI2 242 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 PROKR2Q8NFJ6 384 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 OR56B2PQ8NGI1 322 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 OR2T4Q8NH00 348 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 GATAD2BQ8WXI9 593 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 DYRK2Q92630 601 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 NSRP1Q9H0G5 558 aaKnown RBP8.51□□□□□ -1.05
VPS50-201ENST00000251739 OPA3Q9H6K4 179 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 EGLN3Q9H6Z9 239 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 ACOXLQ9NUZ1 547 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 C1orf123Q9NWV4 160 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 ADA2Q9NZK5 511 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 ERVK-18Q9QC07 812 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 LYVE1Q9Y5Y7 322 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 DNAH3Q8TD57 4116 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 TRAV38-1A0A0B4J264 116 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 CLPSL1A2RUU4 121 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 DVL1O14640 695 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 IGHV4-59P01825 116 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 H2AFB1P0C5Y9 115 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 H2AFB2P0C5Z0 115 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 ZNF823P16415 610 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 MAGEA2P43356 314 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 PDCD1Q15116 288 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 MIDNQ504T8 468 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 SAMD4BQ5PRF9 694 aaKnown RBP8.5□□□□□ -1.05
VPS50-201ENST00000251739 LINC01590Q5TEZ4 76 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 FDX2Q6P4F2 183 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 PRSS45Q7RTY3 260 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 DCXRQ7Z4W1 244 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 PGAM4Q8N0Y7 254 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 LNX2Q8N448 690 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 PNLDC1Q8NA58 520 aaKnown RBP8.5□□□□□ -1.05
VPS50-201ENST00000251739 SLC37A3Q8NCC5 494 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 LY6G5BQ8NDX9 201 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 OR9Q2Q8NGE9 314 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 OR4C15Q8NGM1 316 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 GNPDA2Q8TDQ7 276 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 SLAMF6Q96DU3 332 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 NSMCE2Q96MF7 247 aa8.5□□□□□ -1.05
VPS50-201ENST00000251739 RPUSD1Q9UJJ7 312 aaKnown RBP8.5□□□□□ -1.05
VPS50-201ENST00000251739 A0A0U1RQK1 487 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 A0A1B0GW55 424 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 GGT3PA6NGU5 568 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 ZNF878C9JN71 531 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 XRCC2O43543 280 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 GPR137BO60478 399 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 GMNNO75496 209 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 KRT36O76013 467 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 CLPXO76031 633 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 ECDO95905 644 aaPredicted RBP8.49□□□□□ -1.05
VPS50-201ENST00000251739 GYPAP02724 150 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 DUX4L2P0CJ85 424 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 DUX4L3P0CJ86 424 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 DUX4L4P0CJ87 422 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 DUX4L5P0CJ88 424 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 DUX4L6P0CJ89 424 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 DUX4L7P0CJ90 424 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 SLC2A1P11166 492 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 SPI1P17947 270 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 MSX2P35548 267 aaPredicted RBP8.49□□□□□ -1.05
VPS50-201ENST00000251739 DDOSTP39656 456 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 IER3P46695 156 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 ENTPD1P49961 510 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 PRKXP51817 358 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 SLC25A1P53007 311 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 PROK1P58294 105 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 ELF3P78545 371 aaPredicted RBP8.49□□□□□ -1.05
VPS50-201ENST00000251739 GABPB1Q06547 395 aaPredicted RBP8.49□□□□□ -1.05
VPS50-201ENST00000251739 CRMP1Q14194 572 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 OR8B8Q15620 311 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 KLHL12Q53G59 568 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 METTL11BQ5VVY1 283 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 DUX4L9Q6RFH8 374 aaPredicted RBP8.49□□□□□ -1.05
VPS50-201ENST00000251739 METAP1DQ6UB28 335 aaPredicted RBP8.49□□□□□ -1.05
VPS50-201ENST00000251739 WDR82Q6UXN9 313 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 C17orf107Q6ZR85 190 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 RASSF6Q6ZTQ3 369 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 BTN2A1Q7KYR7 527 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 SLC16A9Q7RTY1 509 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 FGFRL1Q8N441 504 aa8.49□□□□□ -1.05
VPS50-201ENST00000251739 BOLLQ8N9W6 283 aaKnown RBP8.49□□□□□ -1.05
VPS50-201ENST00000251739 OR52L1Q8NGH7 329 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms