RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 ING4Q9UNL4 249 aa9.98□□□□□ -0.81
RFPL3-201ENST00000249007 COPS3Q9UNS2 423 aa9.98□□□□□ -0.81
RFPL3-201ENST00000249007 AURKCQ9UQB9 309 aa9.98□□□□□ -0.81
RFPL3-201ENST00000249007 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
RFPL3-201ENST00000249007 ZNF816-ZNF321PA0A0X1KG74 233 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 KIR2DS1A0A191URI9 304 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 LOC102725191A0A1B0GVB3 256 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 TNFRSF13BO14836 293 aaPredicted RBP9.97□□□□□ -0.81
RFPL3-201ENST00000249007 RGS10O43665 173 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 TSC22D2O75157 780 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 S100A8P05109 93 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 CD55P08174 381 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 WNT2P09544 360 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 SMIM6P0DI80 62 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 PRPS1L1P21108 318 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 TGFBR2P37173 567 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 ACAA2P42765 397 aaKnown RBP9.97□□□□□ -0.81
RFPL3-201ENST00000249007 MEOX2P50222 304 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 FGF12P61328 243 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 GNB2P62879 340 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 CD83Q01151 205 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 ZNF91Q05481 1191 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 CD47Q08722 323 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 HERPUD1Q15011 391 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 ZNF124Q15973 351 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 SPATA46Q5T0L3 261 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 HES5Q5TA89 166 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 NXNL2Q5VZ03 156 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 TMEM236Q5W0B7 351 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 DHRS7BQ6IAN0 325 aaPredicted RBP9.97□□□□□ -0.81
RFPL3-201ENST00000249007 ZNF774Q6NX45 483 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 MUC20Q8N307 709 aaPredicted RBP9.97□□□□□ -0.81
RFPL3-201ENST00000249007 MIER2Q8N344 545 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 ZNF283Q8N7M2 679 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 DUSP18Q8NEJ0 188 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 OR1J2Q8NGS2 313 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 DMRTB1Q96MA1 342 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 NSMCE2Q96MF7 247 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 SIGLEC11Q96RL6 698 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 SLC38A1Q9H2H9 487 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 FN3KRPQ9HA64 309 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 IL1RAPQ9NPH3 570 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 ACOT13Q9NPJ3 140 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 GIMAP2Q9UG22 337 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 UBQLN2Q9UHD9 624 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 MAGEL2Q9UJ55 1249 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 BAIAP2Q9UQB8 552 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 ORC6Q9Y5N6 252 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 DNAJC15Q9Y5T4 150 aa9.97□□□□□ -0.81
RFPL3-201ENST00000249007 CDHR4A6H8M9 788 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 SDHDO14521 159 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 ARPC2O15144 300 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 UBDO15205 165 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 AIREO43918 545 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 PTHP01270 115 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 RAP2AP10114 183 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 HLA-DOBP13765 273 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 RPS2P15880 293 aaKnown RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 CD36P16671 472 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 RPS4Y1P22090 263 aaKnown RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 UQCRC2P22695 453 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 MSX2P35548 267 aaPredicted RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 NUP62P37198 522 aaPredicted RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 LIPAP38571 399 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 MPV17P39210 176 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 RFX2P48378 723 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 SLC7A2P52569 658 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 PCBP3P57721 371 aaKnown RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 TNFAIP6P98066 277 aaPredicted RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 EGR4Q05215 589 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 TBCEQ15813 527 aaPredicted RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 ZNF718Q3SXZ3 478 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 TMEM255AQ5JRV8 349 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 THEM4Q5T1C6 240 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 LAMTOR1Q6IAA8 161 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 CYP2R1Q6VVX0 501 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 H1FNTQ75WM6 255 aaPredicted RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 ZBTB46Q86UZ6 589 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 C9orf62Q8N4C0 152 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 SLC22A24Q8N4F4 322 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 YIPF7Q8N8F6 280 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 OR8H1Q8NGG4 311 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 OR4A15Q8NGL6 344 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 TRNT1Q96Q11 434 aaKnown RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 NUDT16L1Q9BRJ7 211 aaKnown RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 TOR3AQ9H497 397 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 BIN3Q9NQY0 253 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 MCUBQ9NWR8 336 aa9.96□□□□□ -0.82
RFPL3-201ENST00000249007 CGGBP1Q9UFW8 167 aaPredicted RBP9.96□□□□□ -0.82
RFPL3-201ENST00000249007 RPS10-NUDT3A0A1W2PQS6 291 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 ZNF726A6NNF4 738 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 K7EIL1 84 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 FZD7O75084 574 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 HLA-DQB1P01920 261 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 DBIP07108 87 aaKnown RBP9.95□□□□□ -0.82
RFPL3-201ENST00000249007 CBLP22681 906 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 CPT2P23786 658 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 GRPRP30550 384 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 IER3P46695 156 aa9.95□□□□□ -0.82
RFPL3-201ENST00000249007 NCS1P62166 190 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms