RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 STEAP1BQ6NZ63 245 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 Q6ZWC4 215 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 LYPD6Q86Y78 171 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 PRSS58Q8IYP2 241 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 OR8H3Q8N146 312 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 SLC25A45Q8N413 288 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 RNF133Q8WVZ7 376 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 PNPLA2Q96AD5 504 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 NUDT16L1Q9BRJ7 211 aaKnown RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 GINS4Q9BRT9 223 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 OR11A1Q9GZK7 315 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 UBE2ZQ9H832 354 aaPredicted RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 MOB1AQ9H8S9 216 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 APMAPQ9HDC9 416 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 G6PC2Q9NQR9 355 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 SDHAF3Q9NRP4 125 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 TAS2R4Q9NYW5 299 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 WNT16Q9UBV4 365 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 OPN4Q9UHM6 478 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 KIF25Q9UIL4 384 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 OR52A1Q9UKL2 312 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 RPH3AQ9Y2J0 694 aaPredicted RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 UBE2J1Q9Y385 318 aaPredicted RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 LOC107986453A0A1B0GWG9 222 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 LIPT2A6NK58 231 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 C17orf51A8MQB3 221 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 MCRIP1C9JLW8 97 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 L7N2F9 121 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 GMFGO60234 142 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 PMS2P2O95744 297 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 CD74P04233 296 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 HEXBP07686 556 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 PTHLHP12272 177 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 FOSL2P15408 326 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 NFYAP23511 347 aaPredicted RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 MPZP25189 248 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 GMFBP60983 142 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 TLE3Q04726 772 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 MELKQ14680 651 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 ETFDHQ16134 617 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 ZNF239Q16600 458 aaKnown RBP6.93□□□□□ -1.3
CXCR4-201ENST00000241393 ODF4Q2M2E3 257 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 GLYATL3Q5SZD4 288 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 FAAP20Q6NZ36 180 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM205Q6UW68 189 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 GABRG1Q8N1C3 465 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 OR2AK2Q8NG84 335 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 OR13C3Q8NGS6 347 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 PIGKQ92643 395 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 SEH1LQ96EE3 360 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 RBP7Q96R05 134 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 CMKLR1Q99788 373 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 UQCC2Q9BRT2 126 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 SLC7A5P2Q9GIP4 190 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 ATG5Q9H1Y0 275 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 SERINC1Q9NRX5 453 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 CA10Q9NS85 328 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 MED9Q9NWA0 146 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 GLTPQ9NZD2 209 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 RAB22AQ9UL26 194 aa6.93□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM269A0A1B0GVZ9 245 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 METTL21EPA6NDL7 271 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 F5H5P2 479 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 ZFAND5O76080 213 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 KDM4BO94953 1096 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 RAB3DO95716 219 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 CRYZL1O95825 349 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 H2BFMP0C1H6 154 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 RRASP10301 218 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 CALCRP30988 508 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 ZNF41P51814 821 aaPredicted RBP6.92□□□□□ -1.3
CXCR4-201ENST00000241393 FBXW4P57775 412 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 ARPC4P59998 168 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 SEC61A1P61619 476 aaKnown RBP6.92□□□□□ -1.3
CXCR4-201ENST00000241393 FOXF1Q12946 379 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 MEF2DQ14814 521 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 OR7A5Q15622 319 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 THEM4Q5T1C6 240 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 CCDC144NLQ6NUI1 221 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 LPCAT3Q6P1A2 487 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 PAPD4Q6PIY7 484 aaKnown RBP6.92□□□□□ -1.3
CXCR4-201ENST00000241393 NHLRC1Q6VVB1 395 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 C3P1Q6ZMU1 363 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 DCXRQ7Z4W1 244 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 PEG10Q86TG7 708 aaKnown RBP6.92□□□□□ -1.3
CXCR4-201ENST00000241393 BIVMQ86UB2 503 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.92□□□□□ -1.3
CXCR4-201ENST00000241393 NAXDQ8IW45 347 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 OR51S1Q8NGJ8 323 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 CLDN23Q96B33 292 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 ELMOD3Q96FG2 381 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 EDEM2Q9BV94 578 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 MRPL13Q9BYD1 178 aaKnown RBP6.92□□□□□ -1.3
CXCR4-201ENST00000241393 SLC26A1Q9H2B4 701 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 FAM206AQ9NX38 181 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 SLC2A8Q9NY64 477 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 C19orf25Q9UFG5 118 aaPredicted RBP6.92□□□□□ -1.3
CXCR4-201ENST00000241393 RHBDD3Q9Y3P4 386 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 FER1L5A0AVI2 2057 aa6.92□□□□□ -1.3
CXCR4-201ENST00000241393 TP53BP1Q12888 1972 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms