RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SERPINA5P05154 406 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 SCN1BQ07699 218 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 EIF2S3LQ2VIR3 472 aaKnown RBP13.2□□□□□ -0.3
HDHD3-201ENST00000238379 UNQ6494/PRO21346Q6UXR6 183 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 C3P1Q6ZMU1 363 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 UTS2BQ765I0 119 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 CDH26Q8IXH8 852 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 S100A16Q96FQ6 103 aaKnown RBP13.2□□□□□ -0.3
HDHD3-201ENST00000238379 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 ZFP3Q96NJ6 502 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 UQCC2Q9BRT2 126 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 CHST5Q9GZS9 411 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 KCNK15Q9H427 330 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 PROCRQ9UNN8 238 aa13.2□□□□□ -0.3
HDHD3-201ENST00000238379 RP1L1Q8IWN7 2480 aaPredicted RBP13.19□□□□□ -0.3
HDHD3-201ENST00000238379 hCG_38984A0A1B0GV85 526 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 LDLRAD4O15165 306 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 XRCC2O43543 280 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 ALX3O95076 343 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 IL2RAP01589 272 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 HLA-DQB1P01920 261 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 ALDOBP05062 364 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 ARSBP15848 533 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 CCNOP22674 350 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 EFNB2P52799 333 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 DEFA1P59665 94 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 DEFA3P59666 94 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 FAM3AP98173 230 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 UBE2V2Q15819 145 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 PRR30Q53SZ7 412 aaPredicted RBP13.19□□□□□ -0.3
HDHD3-201ENST00000238379 BAIAP2L2Q6UXY1 529 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 RNF144BQ7Z419 303 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 IZUMO1Q8IYV9 350 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 MINDY2Q8NBR6 621 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 C1orf162Q8NEQ5 155 aaPredicted RBP13.19□□□□□ -0.3
HDHD3-201ENST00000238379 SEMA6DQ8NFY4 1073 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 SETD6Q8TBK2 473 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 SSC4DQ8WTU2 575 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 OPN3Q9H1Y3 402 aaPredicted RBP13.19□□□□□ -0.3
HDHD3-201ENST00000238379 ASF1BQ9NVP2 202 aa13.19□□□□□ -0.3
HDHD3-201ENST00000238379 MRPS7Q9Y2R9 242 aaKnown RBP13.19□□□□□ -0.3
HDHD3-201ENST00000238379 TMEM272A0A1B0GTI8 110 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 PRF1P14222 555 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 CEACAM8P31997 349 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 ZNF93P35789 620 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 MAP2K3P46734 347 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 GSK3AP49840 483 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 PRSS12P56730 875 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 UBE2NP61088 152 aaKnown RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 PITPNAQ00169 270 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 RIPPLY1Q0D2K3 151 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 TSC22D1Q15714 1073 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 TAB1Q15750 504 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 BIVMQ86UB2 503 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 DOLPP1Q86YN1 238 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 AKAP1Q92667 903 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 COX4I2Q96KJ9 171 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 RABL2AQ9UBK7 228 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 RABL2BQ9UNT1 228 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 DSPP15924 2871 aaKnown RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 ZZEF1O43149 2961 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 MAGEB3O15480 346 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 PTTG1O95997 202 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 OCMP0CE72 109 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 GLI4P10075 376 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 ZNF14P17017 642 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 CDK2P24941 298 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 APLNRP35414 380 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 PTH2RP49190 550 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 MMP15P51511 669 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 P2RY6Q15077 328 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 OR8B8Q15620 311 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 DMRTC1Q5HYR2 192 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 TRIQKQ629K1 86 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 GDPD3Q7L5L3 318 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 ZCCHC14Q8WYQ9 949 aaKnown RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 APOBEC3DQ96AK3 386 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 SPACA5Q96QH8 159 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 TP63Q9H3D4 680 aaPredicted RBP13.18□□□□□ -0.3
HDHD3-201ENST00000238379 ZNF835Q9Y2P0 537 aa13.18□□□□□ -0.3
HDHD3-201ENST00000238379 A0A1W2PR80 420 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 PRRG2O14669 202 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 CTDSPLO15194 276 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 PLA2G10O15496 165 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 CTAG2O75638 210 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 HCKP08631 526 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 ASAH1Q13510 395 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 GFRALQ6UXV0 394 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 CXorf67Q86X51 503 aaPredicted RBP13.17□□□□□ -0.3
HDHD3-201ENST00000238379 PAQR4Q8N4S7 273 aaPredicted RBP13.17□□□□□ -0.3
HDHD3-201ENST00000238379 WDR31Q8NA23 367 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 SLC30A7Q8NEW0 376 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 TRIM63Q969Q1 353 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 THAP7Q9BT49 309 aaPredicted RBP13.17□□□□□ -0.3
HDHD3-201ENST00000238379 REPIN1Q9BWE0 567 aaKnown RBP13.17□□□□□ -0.3
HDHD3-201ENST00000238379 STARD10Q9Y365 291 aa13.17□□□□□ -0.3
HDHD3-201ENST00000238379 hCG_2014768A0A024R1R8 64 aa13.16□□□□□ -0.3
HDHD3-201ENST00000238379 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms