RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 A0A1W2PQL4 384 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 SLC16A6O15403 523 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 PPIHO43447 177 aaKnown RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 ATP6V1G1O75348 118 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 IGHV2-70P01814 119 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 ERCC1P07992 297 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 H2BFMP0C1H6 154 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 ZNF16P17020 682 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 CA6P23280 308 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 GATA4P43694 442 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 SLC15A1P46059 708 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 GSK3AP49840 483 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 MMP16P51512 607 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 PSMA6P60900 246 aaKnown RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 MVKQ03426 396 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 TAF13Q15543 124 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 OR8B8Q15620 311 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 LAIR2Q6ISS4 152 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 DEGS2Q6QHC5 323 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 PRIMA1Q86XR5 153 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 OR51G2Q8NGK0 314 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 OR13G1Q8NGZ3 307 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 TRUB1Q8WWH5 349 aaKnown RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 CCL17Q92583 94 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 CNN2Q99439 309 aaKnown RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 C9orf16Q9BUW7 83 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 NARFLQ9H6Q4 476 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 DECR2Q9NUI1 292 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 TMEM106BQ9NUM4 274 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 TMEM100Q9NV29 134 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 CLN6Q9NWW5 311 aa11.55□□□□□ -0.56
VEGFA-201ENST00000230480 WARS2Q9UGM6 360 aaKnown RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 PAIP2BQ9ULR5 123 aaKnown RBP11.55□□□□□ -0.56
VEGFA-201ENST00000230480 SLC22A31A6NKX4 558 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 TMEM178BH3BS89 294 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 TNFRSF13BO14836 293 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-201ENST00000230480 WBP4O75554 376 aaKnown RBP11.54□□□□□ -0.56
VEGFA-201ENST00000230480 FCN3O75636 299 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 TTRP02766 147 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 DCTDP32321 178 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 CD200P41217 278 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 ALDH3B2P48448 385 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 CDH15P55291 814 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 CXCR4P61073 352 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 ZMYND11Q15326 602 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 PRAMEF6Q5VXH4 476 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 ZNF322Q6U7Q0 402 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-201ENST00000230480 Q6ZNX1 250 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 Q6ZSR3 168 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 ZNF679Q8IYX0 411 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 ZNF540Q8NDQ6 660 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 HPS1Q92902 700 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 ITPKCQ96DU7 683 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 REEP6Q96HR9 211 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 YAE1D1Q9NRH1 226 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 ENOPH1Q9UHY7 261 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 LAMP5Q9UJQ1 280 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 RHBDD3Q9Y3P4 386 aa11.54□□□□□ -0.56
VEGFA-201ENST00000230480 TBX1O43435 398 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 XRCC2O43543 280 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 CRLF1O75462 422 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 CLIC3O95833 236 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 MT-ND5P03915 603 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 ANXA2P07355 339 aaKnown RBP11.53□□□□□ -0.56
VEGFA-201ENST00000230480 HSD11B1P28845 292 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 ADARB1P78563 741 aaKnown RBP11.53□□□□□ -0.56
VEGFA-201ENST00000230480 MALLQ13021 153 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 CBX3Q13185 183 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 LCN1P1Q5VSP4 162 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 CYB5R2Q6BCY4 276 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 C1orf229Q6ZS94 237 aaPredicted RBP11.53□□□□□ -0.56
VEGFA-201ENST00000230480 MRPL21Q7Z2W9 205 aaKnown RBP11.53□□□□□ -0.56
VEGFA-201ENST00000230480 KRT77Q7Z794 578 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 MOGAT3Q86VF5 341 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 LRRC28Q86X40 367 aaPredicted RBP11.53□□□□□ -0.56
VEGFA-201ENST00000230480 GID4Q8IVV7 300 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 PLPP7Q8NBV4 271 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 TBX5Q99593 518 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 TEX12Q9BXU0 123 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 TMEM165Q9HC07 324 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 RHBDL2Q9NX52 303 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 MRPL15Q9P015 296 aaKnown RBP11.53□□□□□ -0.56
VEGFA-201ENST00000230480 RSL24D1Q9UHA3 163 aaKnown RBP11.53□□□□□ -0.56
VEGFA-201ENST00000230480 EXOGQ9Y2C4 368 aaKnown RBP11.53□□□□□ -0.56
VEGFA-201ENST00000230480 NPTNQ9Y639 398 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 CEPT1Q9Y6K0 416 aa11.53□□□□□ -0.56
VEGFA-201ENST00000230480 COL6A5A8TX70 2615 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 LOC100130705A0A1B0GUX0 176 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 CCDC160A6NGH7 325 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 ZNF254O75437 659 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 ZNF205O95201 554 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 CYB5R3P00387 301 aaPredicted RBP11.52□□□□□ -0.57
VEGFA-201ENST00000230480 AVPP01185 164 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 IGHV2-5P01817 119 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 HNRNPCP07910 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
VEGFA-201ENST00000230480 ZFP36P26651 326 aaKnown RBP11.52□□□□□ -0.57
VEGFA-201ENST00000230480 GZMKP49863 264 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 CDC42P60953 191 aa11.52□□□□□ -0.57
VEGFA-201ENST00000230480 SEC61A1P61619 476 aaKnown RBP11.52□□□□□ -0.57
VEGFA-201ENST00000230480 SMN1Q16637 294 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms