RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 TRGV10A0A0A0MS01 117 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 GPR37O15354 613 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 FUT6P51993 359 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 GP2P55259 537 aaKnown RBP16.54■□□□□ 0.24
CLIP2-201ENST00000223398 FAM27D1Q5T7N8 215 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 MCHR2Q969V1 340 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 PARP12Q9H0J9 701 aaKnown RBP16.54■□□□□ 0.24
CLIP2-201ENST00000223398 TLE4Q04727 773 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 M1APQ8TC57 530 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 CDCA4Q9BXL8 241 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 ZNF425Q6IV72 752 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 FAHD1Q6P587 224 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 OTOSQ8NHW6 89 aa16.54■□□□□ 0.24
CLIP2-201ENST00000223398 ATF1P18846 271 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 CMTM4Q8IZR5 234 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 HFEQ30201 348 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 HRKO00198 91 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 GNG10P50151 68 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 MICBQ29980 383 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 LYPD8Q6UX82 237 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 Q6ZRG5 221 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 IFITM5A6NNB3 132 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 ZIC1Q15915 447 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 PFDN5Q99471 154 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 SIGLEC7Q9Y286 467 aa16.53■□□□□ 0.24
CLIP2-201ENST00000223398 CRYBA1P05813 215 aa16.52■□□□□ 0.24
CLIP2-201ENST00000223398 PPP3CBP16298 524 aa16.52■□□□□ 0.24
CLIP2-201ENST00000223398 HNRNPFP52597 415 aaKnown RBP16.52■□□□□ 0.24
CLIP2-201ENST00000223398 WDR34Q96EX3 536 aa16.52■□□□□ 0.24
CLIP2-201ENST00000223398 C1orf196B1AJZ1 125 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 IMPA2O14732 288 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 PRR35P0CG20 571 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 IAPPP10997 89 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 SRP14P37108 136 aaKnown RBP16.52■□□□□ 0.23
CLIP2-201ENST00000223398 OPCMLQ14982 345 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 NANPQ8TBE9 248 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 FBXW5Q969U6 566 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 SAV1Q9H4B6 383 aaPredicted RBP16.52■□□□□ 0.23
CLIP2-201ENST00000223398 C19orf12Q9NSK7 152 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 TREM2Q9NZC2 230 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 ARRDC5A6NEK1 342 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 HRH1P35367 487 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF816Q0VGE8 651 aaPredicted RBP16.52■□□□□ 0.23
CLIP2-201ENST00000223398 PRDX4Q13162 271 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 RND1Q92730 232 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 SLC26A1Q9H2B4 701 aa16.52■□□□□ 0.23
CLIP2-201ENST00000223398 PLEKHB1Q9UF11 243 aaPredicted RBP16.52■□□□□ 0.23
CLIP2-201ENST00000223398 C21orf140B9A014 251 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 OR5H8P0DN80 308 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 UBE2MP61081 183 aaKnown RBP16.51■□□□□ 0.23
CLIP2-201ENST00000223398 TMEM268Q5VZI3 342 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 PRSS42Q7Z5A4 293 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 SERTM1A2A2V5 107 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 ARPC3O15145 178 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 ADH4P08319 380 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 OR5G3P0C626 314 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 TSPAN32Q96QS1 320 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 COL11A2P13942 1736 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-201ENST00000223398 SHANK3Q9BYB0 1731 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 OR2M5A3KFT3 312 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 C3orf80F5H4A9 247 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 FTH1P19P0C7X4 201 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF266Q14584 549 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 ISXQ2M1V0 245 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 C20orf196Q8IYI0 205 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 UBTD1Q9HAC8 227 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 PURGQ9UJV8 347 aaKnown RBP16.51■□□□□ 0.23
CLIP2-201ENST00000223398 DEFB108AA8MXU0 73 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 HLA-DOBP13765 273 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 CASP3P42574 277 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 SLC36A1Q7Z2H8 476 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 ADPRHL1Q8NDY3 354 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 GPR32P1Q8NGA4 272 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 GALMQ96C23 342 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 OR8B4Q96RC9 309 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 AGFG2O95081 481 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 JUNBP17275 347 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-201ENST00000223398 F2RP25116 425 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 UBE2KP61086 200 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 CALHM3Q86XJ0 350 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 BSCL2Q96G97 398 aaPredicted RBP16.51■□□□□ 0.23
CLIP2-201ENST00000223398 DERL3Q96Q80 235 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 ISYNA1Q9NPH2 558 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 TAAR3PQ9P1P4 343 aa16.51■□□□□ 0.23
CLIP2-201ENST00000223398 MARF1Q9Y4F3 1742 aaKnown RBP16.5■□□□□ 0.23
CLIP2-201ENST00000223398 A0A1W2PRD5 423 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 A0A1W2PRF3 423 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 A0A1W2PRM7 423 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 FABP1P07148 127 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 TNFAIP6P98066 277 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-201ENST00000223398 SLC39A7Q92504 469 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 SCPEP1Q9HB40 452 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 EXOSC3Q9NQT5 275 aaKnown RBP16.5■□□□□ 0.23
CLIP2-201ENST00000223398 ZFP92A6NM28 416 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF705FA8MVS1 300 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF705DP0CH99 300 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-201ENST00000223398 ZNF705BP0CI00 300 aaPredicted RBP16.5■□□□□ 0.23
CLIP2-201ENST00000223398 CCL3P10147 92 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 TUSC5Q8IXB3 177 aa16.5■□□□□ 0.23
CLIP2-201ENST00000223398 TMEM104Q8NE00 496 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms