RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 CDKN2AP42771 156 aaKnown RBP13.11□□□□□ -0.31
PTPRA-201ENST00000216877 GRK6P43250 576 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 PTTG1IPP53801 180 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 ADGRE4PQ86SQ3 457 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 OR5R1Q8NH85 324 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 LAMP3Q9UQV4 416 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 RNF24Q9Y225 148 aa13.11□□□□□ -0.31
PTPRA-201ENST00000216877 TRAPPC6AO75865 159 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 OR5H8P0DN80 308 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 GABRA4P48169 554 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 CCL20P78556 96 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 DEFB103AP81534 67 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 ITPRIPL2Q3MIP1 535 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 DCST2Q5T1A1 773 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 ZDHHC22Q8N966 263 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 FAM174AQ8TBP5 190 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 TVP23CQ96ET8 276 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 NUDT9Q9BW91 350 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 CENPMQ9NSP4 180 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 LRFN1Q9P244 771 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 MYOTQ9UBF9 498 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 WSB1Q9Y6I7 421 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 SLC25A24Q6NUK1 477 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 RTN4RL2Q86UN3 420 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 NPEPL1Q8NDH3 523 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 OR2I1PQ8NGU4 316 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 C22orf15Q8WYQ4 148 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 TMED3Q9Y3Q3 217 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 FAM221AA4D161 298 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 MPIG6BO95866 241 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 SELEP16581 610 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 MMP16P51512 607 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 PRPS1P60891 318 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 RPL23AP62750 156 aaKnown RBP13.1□□□□□ -0.31
PTPRA-201ENST00000216877 FCRL6Q6DN72 434 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
PTPRA-201ENST00000216877 CPEB2Q7Z5Q1 589 aaKnown RBP13.1□□□□□ -0.31
PTPRA-201ENST00000216877 ZNF619Q8N2I2 560 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 BEND2Q8NDZ0 799 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 OR5H2Q8NGV7 314 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 STT3BQ8TCJ2 826 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 ALG14Q96F25 216 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 PRRX2Q99811 253 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 DUSP15Q9H1R2 295 aaPredicted RBP13.1□□□□□ -0.31
PTPRA-201ENST00000216877 FOXJ2Q9P0K8 574 aa13.1□□□□□ -0.31
PTPRA-201ENST00000216877 XIRP2A4UGR9 3374 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 RBFOX3A6NFN3 312 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 ZNF878C9JN71 531 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 UPK3AO75631 287 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 ABLIM3O94929 683 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 NGFRP08138 427 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 CTHP32929 405 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 H3F3AP84243 136 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 TEX38Q6PEX7 206 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 OR2G3Q8NGZ4 309 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 CCNL2Q96S94 520 aaPredicted RBP13.09□□□□□ -0.31
PTPRA-201ENST00000216877 MENTQ9BUN1 341 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 YIPF1Q9Y548 306 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 MYO16Q9Y6X6 1858 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 MLF1P58340 268 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 TMEM64Q6YI46 380 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 FIBINQ8TAL6 211 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 R3HDM4Q96D70 268 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 LYSMD1Q96S90 227 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 URM1Q9BTM9 101 aaKnown RBP13.09□□□□□ -0.31
PTPRA-201ENST00000216877 ABHD14AQ9BUJ0 271 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 ELL3Q9HB65 397 aaPredicted RBP13.09□□□□□ -0.31
PTPRA-201ENST00000216877 GRHPRQ9UBQ7 328 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 TRIOBPQ9H2D6 2365 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 B4E171 279 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 IRF2P14316 349 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 CD33P20138 364 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 FUT3P21217 361 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 IGFBP4P22692 258 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 CD82P27701 267 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 TMEM225Q6GV28 225 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 C12orf76Q8N812 135 aaPredicted RBP13.09□□□□□ -0.31
PTPRA-201ENST00000216877 REEP6Q96HR9 211 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 AMELYQ99218 206 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 PLXNA4Q9HCM2 1894 aa13.09□□□□□ -0.31
PTPRA-201ENST00000216877 TMEM269A0A1B0GVZ9 245 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 ZFP92A6NM28 416 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 FTCDNL1E5RQL4 147 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 DVL1O14640 695 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 LDB3O75112 727 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 FCARP24071 287 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 SSBP1Q04837 148 aaKnown RBP13.08□□□□□ -0.32
PTPRA-201ENST00000216877 GPR18Q14330 331 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 IQCJQ1A5X6 159 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 SP6Q3SY56 376 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 MED25Q71SY5 747 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 SGPP2Q8IWX5 399 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
PTPRA-201ENST00000216877 HIST1H2AAQ96QV6 131 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 SERINC2Q96SA4 455 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 INSL5Q9Y5Q6 135 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 SFT2D2O95562 160 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 CPMP14384 443 aa13.08□□□□□ -0.32
PTPRA-201ENST00000216877 WNT5AP41221 380 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms