RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 GMPPAQ96IJ6 420 aaPredicted RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 OR3A4PP47883 348 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 SH2D5Q6ZV89 423 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 OR51H1Q8NH63 302 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 MCHR2Q969V1 340 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 TEAD3Q99594 435 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 HEYLQ9NQ87 328 aaPredicted RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 TFAP2AP05549 437 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 HOXD4P09016 255 aaPredicted RBP12.28□□□□□ -0.44
SIX4-201ENST00000216513 RELAQ04206 551 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 GDPD1Q8N9F7 314 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 OR14K1Q8NGZ2 314 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
SIX4-201ENST00000216513 FLVCR2Q9UPI3 526 aa12.28□□□□□ -0.44
SIX4-201ENST00000216513 TCRBV16S1A1N1A0A5B0 115 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 SDCBPO00560 298 aaPredicted RBP12.27□□□□□ -0.44
SIX4-201ENST00000216513 PTHLHP12272 177 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 RPS19P39019 145 aaKnown RBP12.27□□□□□ -0.44
SIX4-201ENST00000216513 TESK1Q15569 626 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 PDLIM3Q53GG5 364 aaPredicted RBP12.27□□□□□ -0.44
SIX4-201ENST00000216513 LACC1Q8IV20 430 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 PCGF1Q9BSM1 259 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 FAM157AC9JC47 383 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 H3BMH7 237 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 FOXS1O43638 330 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 FAHP16930 419 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 KITLGP21583 273 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 ACHEP22303 614 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 ZNF74Q16587 644 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 FAM27D1Q5T7N8 215 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 RHOUQ7L0Q8 258 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 BORCS7Q96B45 105 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 HYLS1Q96M11 299 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 TUBG2Q9NRH3 451 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 PSORS1C1Q9UIG5 152 aa12.27□□□□□ -0.44
SIX4-201ENST00000216513 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.45
SIX4-201ENST00000216513 CLDN1O95832 211 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 ZNF705DP0CH99 300 aaPredicted RBP12.27□□□□□ -0.45
SIX4-201ENST00000216513 ZNF705BP0CI00 300 aaPredicted RBP12.27□□□□□ -0.45
SIX4-201ENST00000216513 TAS2R20P59543 309 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 RAB5BP61020 215 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 MALSU1Q96EH3 234 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 C4orf45Q96LM5 186 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 POFUT1Q9H488 388 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 MOB1AQ9H8S9 216 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 RNF150Q9ULK6 438 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 NUBP2Q9Y5Y2 271 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 F2RL2O00254 374 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 SLC16A6O15403 523 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 SOD1P00441 154 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 ANKRD34CP0C6C1 535 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 LRRC56Q8IYG6 542 aaPredicted RBP12.27□□□□□ -0.45
SIX4-201ENST00000216513 OR1M1Q8NGA1 313 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 C1QTNF3Q9BXJ4 246 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 ADAM19Q9H013 955 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 BARX1Q9HBU1 254 aaPredicted RBP12.27□□□□□ -0.45
SIX4-201ENST00000216513 NRIP3Q9NQ35 241 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 CISD1Q9NZ45 108 aaKnown RBP12.27□□□□□ -0.45
SIX4-201ENST00000216513 TINAGQ9UJW2 476 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 MAGEB1P43366 347 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 ZNF133P52736 654 aaPredicted RBP12.27□□□□□ -0.45
SIX4-201ENST00000216513 PRRT1Q99946 306 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 C11orf54Q9H0W9 315 aaPredicted RBP12.27□□□□□ -0.45
SIX4-201ENST00000216513 B9D1Q9UPM9 204 aa12.27□□□□□ -0.45
SIX4-201ENST00000216513 AIPO00170 330 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 IGHV3-13P01766 116 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 IGHV3-7P01780 117 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 SBK3P0C264 359 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 TAS2R31P59538 309 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 MEF2DQ14814 521 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 PRAMEF5Q5TYX0 476 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 METTL11BQ5VVY1 283 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 PRAMEF6Q5VXH4 476 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 OR10AD1Q8NGE0 317 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 AKR1E2Q96JD6 320 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 SPACA1Q9HBV2 294 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 BCL2L10Q9HD36 194 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 C9orf40Q8IXQ3 194 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 OR10V1Q8NGI7 309 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 SLC35B4Q969S0 331 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 UCN2Q96RP3 112 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 MS4A5Q9H3V2 200 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 ZCCHC4Q9H5U6 513 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 SLC22A13Q9Y226 551 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 TUBGCP6Q96RT7 1819 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 UNC13CQ8NB66 2214 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 PHF1O43189 567 aaPredicted RBP12.26□□□□□ -0.45
SIX4-201ENST00000216513 ZNF728P0DKX0 622 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 MLLT11Q13015 90 aaPredicted RBP12.26□□□□□ -0.45
SIX4-201ENST00000216513 BTN1A1Q13410 526 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 ZNF620Q6ZNG0 422 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 C12orf45Q8N5I9 185 aaPredicted RBP12.26□□□□□ -0.45
SIX4-201ENST00000216513 TDRD6O60522 2096 aaKnown RBP12.26□□□□□ -0.45
SIX4-201ENST00000216513 SSX4O60224 188 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 ZNF26P17031 533 aaPredicted RBP12.26□□□□□ -0.45
SIX4-201ENST00000216513 SLC37A1P57057 533 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 HTD2P86397 168 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 CFHR1Q03591 330 aa12.26□□□□□ -0.45
SIX4-201ENST00000216513 ZNF546Q86UE3 836 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms