RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 DUX4L2P0CJ85 424 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 DUX4L3P0CJ86 424 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 DUX4L4P0CJ87 422 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 DUX4L5P0CJ88 424 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 DUX4L6P0CJ89 424 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 DUX4L7P0CJ90 424 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 RAB3AP20336 220 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 CD27P26842 260 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 PSMB6P28072 239 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 EMP2P54851 167 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 SRSF3P84103 164 aaKnown RBP12.26□□□□□ -0.45
PHGDH-233ENST00000642021 C5orf46Q6UWT4 87 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 HOGA1Q86XE5 327 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 D2HGDHQ8N465 521 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 SMRP1Q8NCR6 262 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 CLRN3Q8NCR9 226 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 C1orf147Q96MC9 270 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-233ENST00000642021 ADAT1Q9BUB4 502 aaKnown RBP12.26□□□□□ -0.45
PHGDH-233ENST00000642021 BANF2Q9H503 90 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 CHMP1AQ9HD42 196 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-233ENST00000642021 ASF1BQ9NVP2 202 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 DUX4Q9UBX2 424 aa12.26□□□□□ -0.45
PHGDH-233ENST00000642021 RPH3AQ9Y2J0 694 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-233ENST00000642021 PHF3Q92576 2039 aaKnown RBP12.25□□□□□ -0.45
PHGDH-233ENST00000642021 A0A1B0GX78 115 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 LIPT2A6NK58 231 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF98A6NK75 572 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 OR6C76A6NM76 312 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 MPTX1A8MV57 137 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 ST8SIA5O15466 376 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 FOSL2P15408 326 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 PI3P19957 117 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 LBX1P52954 281 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM50BP56557 158 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 FAHD2BQ6P2I3 314 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-233ENST00000642021 KLHL24Q6TFL4 600 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 GLIPR1L1Q6UWM5 242 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 TSTD1Q8NFU3 115 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 OR10H5Q8NGA6 315 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 PIK3IP1Q96FE7 263 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 FAHD2AQ96GK7 314 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 SLC2A4RGQ9NR83 387 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 SLC39A1Q9NY26 324 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 LHFPL6Q9Y693 200 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 CABIN1Q9Y6J0 2220 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 METTL12A8MUP2 240 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 RAD51DO75771 328 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF17P17021 662 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 APOBEC1P41238 236 aaKnown RBP12.25□□□□□ -0.45
PHGDH-233ENST00000642021 OR3A4PP47883 348 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 NPY4RP50391 375 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 C17orf67Q0P5P2 114 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 SYT13Q7L8C5 426 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 OR5AS1Q8N127 324 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 DTWD2Q8NBA8 298 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 OR4K17Q8NGC6 315 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 ST8SIA1Q92185 356 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM230Q96A57 120 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF416Q9BWM5 594 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 MRPL13Q9BYD1 178 aaKnown RBP12.25□□□□□ -0.45
PHGDH-233ENST00000642021 PIGMQ9H3S5 423 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 C5orf66Q9H5L9 145 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 SEC61A2Q9H9S3 476 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 SDHAF3Q9NRP4 125 aa12.25□□□□□ -0.45
PHGDH-233ENST00000642021 NDUFS6O75380 124 aaKnown RBP12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ADAP1O75689 374 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ATG12O94817 140 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 MPIG6BO95866 241 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ACTL6AO96019 429 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF124Q15973 351 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 GUCA2BQ16661 112 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 C21orf62-AS1Q17RA5 79 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ZSCAN4Q8NAM6 433 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-233ENST00000642021 OR6S1Q8NH40 331 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 DCUN1D4Q92564 292 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 PCDHB16Q9NRJ7 776 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 SPAG17Q6Q759 2223 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-233ENST00000642021 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 MSGN1A6NI15 193 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ABCD4O14678 606 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 SELLP14151 372 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 LAP3P28838 519 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 S100A12P80511 92 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 SCRN3Q0VDG4 424 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 PABPC1L2AQ5JQF8 200 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM88Q6PEY1 159 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 DBX2Q6ZNG2 339 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 PUSL1Q8N0Z8 303 aaKnown RBP12.24□□□□□ -0.45
PHGDH-233ENST00000642021 SLC38A9Q8NBW4 561 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 PLPP5Q8NEB5 264 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 TERB2Q8NHR7 220 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 STT3BQ8TCJ2 826 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ELP5Q8TE02 316 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 ZNF501Q96CX3 271 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-233ENST00000642021 TMEM41AQ96HV5 264 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 CYTL1Q9NRR1 136 aa12.24□□□□□ -0.45
PHGDH-233ENST00000642021 FGF21Q9NSA1 209 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms