RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 PHYHO14832 338 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 GMDSO60547 372 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 PLATP00750 562 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 PPIAL4GP0DN37 164 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 PSMB10P40306 273 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 SLC25A1P53007 311 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 TRIM25Q14258 630 aaKnown RBP11.59□□□□□ -0.55
LINC00339-211ENST00000641009 PCK2Q16822 640 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 OR2T33Q8NG76 320 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 OR56B2PQ8NGI1 322 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 NSL1Q96IY1 281 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 KCNJ15Q99712 375 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 NIPSNAP1Q9BPW8 284 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 DGCR6LQ9BY27 220 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 MMADHCQ9H3L0 296 aaPredicted RBP11.59□□□□□ -0.55
LINC00339-211ENST00000641009 MED20Q9H944 212 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 MRPL15Q9P015 296 aaKnown RBP11.59□□□□□ -0.55
LINC00339-211ENST00000641009 RNF7Q9UBF6 113 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 BAIAP2Q9UQB8 552 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 NOP16Q9Y3C1 178 aaKnown RBP11.59□□□□□ -0.55
LINC00339-211ENST00000641009 PCDHGB1Q9Y5G3 927 aa11.59□□□□□ -0.55
LINC00339-211ENST00000641009 MDFIC2A0A1B0GVS7 189 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 DHRS12A0PJE2 317 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 FAM183AA6NL82 134 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 C22orf46C9J442 243 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 PTBP3O95758 552 aaKnown RBP11.58□□□□□ -0.56
LINC00339-211ENST00000641009 GRPP07492 148 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 FOXL1Q12952 345 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 FAM98BQ52LJ0 330 aaKnown RBP11.58□□□□□ -0.56
LINC00339-211ENST00000641009 TEX30Q5JUR7 227 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 BRD3OSQ6XYD6 125 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 ZNF826PQ6ZT77 177 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 C9orf139Q6ZV77 190 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 ARHGAP24Q8N264 748 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 TAF15Q92804 592 aaKnown RBP eCLIP11.58□□□□□ -0.56
LINC00339-211ENST00000641009 TECTBQ96PL2 329 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 CCT8L2Q96SF2 557 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 MUC13Q9H3R2 512 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 CTSZQ9UBR2 303 aa11.58□□□□□ -0.56
LINC00339-211ENST00000641009 RIIAD1A6NNX1 92 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 TBX1O43435 398 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 SPRY1O43609 319 aaPredicted RBP11.57□□□□□ -0.56
LINC00339-211ENST00000641009 IFNGP01579 166 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 ZNF3P17036 446 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 MTNR1AP48039 350 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 CX3CR1P49238 355 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 FGF12P61328 243 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 EIF2B1Q14232 305 aaKnown RBP11.57□□□□□ -0.56
LINC00339-211ENST00000641009 SLC9A3R2Q15599 337 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 LINC01590Q5TEZ4 76 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 IQCF1Q8N6M8 205 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 OR10G2Q8NGC3 310 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 SLC25A28Q96A46 364 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 OTULINQ96BN8 352 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 CCDC124Q96CT7 223 aaKnown RBP11.57□□□□□ -0.56
LINC00339-211ENST00000641009 CLPTM1LQ96KA5 538 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 ZMAT3Q9HA38 289 aaKnown RBP11.57□□□□□ -0.56
LINC00339-211ENST00000641009 CMC2Q9NRP2 79 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 C1orf123Q9NWV4 160 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 A6NLC8 198 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 LGALS8O00214 317 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 ADAM20O43506 726 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 XRCC2O43543 280 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 ANXA2P07355 339 aaKnown RBP11.57□□□□□ -0.56
LINC00339-211ENST00000641009 RNASE1P07998 156 aaKnown RBP11.57□□□□□ -0.56
LINC00339-211ENST00000641009 GRB2P62993 217 aaKnown RBP11.57□□□□□ -0.56
LINC00339-211ENST00000641009 OR8B8Q15620 311 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 SLC16A9Q7RTY1 509 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 DPY19L4Q7Z388 723 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 ERI1Q8IV48 349 aaKnown RBP11.57□□□□□ -0.56
LINC00339-211ENST00000641009 PLPP7Q8NBV4 271 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 OR6N2Q8NGY6 317 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 SGMS2Q8NHU3 365 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 TEX47Q8TBZ9 253 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 SPSB4Q96A44 273 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 FEVQ99581 238 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 RASSF4Q9H2L5 321 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 OPA3Q9H6K4 179 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 SMURF1Q9HCE7 757 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 DNAJC27Q9NZQ0 273 aa11.57□□□□□ -0.56
LINC00339-211ENST00000641009 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.56□□□□□ -0.56
LINC00339-211ENST00000641009 hCG_1807616A0A1W2PRN6 198 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 OOEPA6NGQ2 149 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 H3BN98 237 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 ENSAO43768 121 aaKnown RBP11.56□□□□□ -0.56
LINC00339-211ENST00000641009 GYPAP02724 150 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 SFTPBP07988 381 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 T-ENOLP0DO92 83 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 RAP2AP10114 183 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 CALB2P22676 271 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 HSD11B1P28845 292 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 SLC15A1P46059 708 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 NPY4RP50391 375 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 FAM3AP98173 230 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 POU4F2Q12837 409 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 KCNJ8Q15842 424 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 TIGD6Q17RP2 521 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 GCSAMQ8N6F7 178 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 SPERTQ8NA61 448 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 ASB9Q96DX5 294 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms