RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	DAP3	P51398	398 aa	Known RBP	5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	ATP1B3	P54709	279 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	WNT3	P56703	355 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	TAS2R43	P59537	309 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	PRTG	Q2VWP7	1150 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	SNAI3	Q3KNW1	292 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	C4orf48	Q5BLP8	95 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	FAM78B	Q5VT40	261 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	APOOL	Q6UXV4	268 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072		Q6ZNB5	142 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	SYS1	Q8N2H4	156 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	ACVR1C	Q8NER5	493 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	MDGA1	Q8NFP4	955 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	OCC1	Q8TAD7	63 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	ABHD4	Q8TB40	342 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	CWH43	Q9H720	699 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	TNFRSF12A	Q9NP84	129 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	GPATCH2L	Q9NWQ4	482 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	PLAGL1	Q9UM63	463 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	FCF1	Q9Y324	198 aa	Known RBP	5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	WDR45	Q9Y484	360 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	UBIAD1	Q9Y5Z9	338 aa		5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	BAZ2A	Q9UIF9	1905 aa	Known RBP	5.51	□□□□□ -1.53
NECAP1-222	ENST00000640072	LRRC37A3	O60309	1634 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072		A0A1B0GUS0	222 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	UNC119B	A6NIH7	251 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	UMAD1	C9J7I0	102 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	ALOX12B	O75342	701 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TSPAN15	O95858	294 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TRGC2	P03986	189 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	WNT1	P04628	370 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	OR5AC1	P0C628	307 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	CEL	P19835	753 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	AGTR2	P50052	363 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	HSD11B2	P80365	405 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	POU2AF1	Q16633	256 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	OR4A47	Q6IF82	309 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	ZNF534	Q76KX8	674 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	COX15	Q7KZN9	410 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	KCNRG	Q8N5I3	272 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	METTL27	Q8N6F8	245 aa	Predicted RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	PTGR2	Q8N8N7	351 aa	Predicted RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	RGP1	Q92546	391 aa	Predicted RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	EMG1	Q92979	244 aa	Known RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	WDR34	Q96EX3	536 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	C12orf42	Q96LP6	360 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	CIB3	Q96Q77	187 aa	Predicted RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	LYSMD1	Q96S90	227 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TSSK6	Q9BXA6	273 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	OR8D2	Q9GZM6	311 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	ATG10	Q9H0Y0	220 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	AIG1	Q9NVV5	245 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	ZNF226	Q9NYT6	803 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	SLC25A10	Q9UBX3	287 aa	Predicted RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	CHD3	Q12873	2000 aa	Known RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TRAV30	A0A087WSZ9	112 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	MSC	O60682	206 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	HPRT1	P00492	218 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	EDN1	P05305	212 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	SBK3	P0C264	359 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TDGF1	P13385	188 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	FAU	P35544	74 aa	Known RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	UCP3	P55916	312 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	OR12D2	P58182	307 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	ERVPABLB-1	P60509	514 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TLE3	Q04726	772 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	NR0B2	Q15466	257 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	METRNL	Q641Q3	311 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	OR4A4P	Q8NGN8	299 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	JSRP1	Q96MG2	331 aa	Predicted RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TIMP4	Q99727	224 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	FAIM2	Q9BWQ8	316 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	SLC25A31	Q9H0C2	315 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TUBB1	Q9H4B7	451 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	HEYL	Q9NQ87	328 aa	Predicted RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TMEM38B	Q9NVV0	291 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	SLC23A2	Q9UGH3	650 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	ZNF337	Q9Y3M9	751 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	SPEF2	Q9C093	1822 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	PARP4	Q9UKK3	1724 aa	Known RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	SHISA7	A6NL88	538 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072		B5MCH6	92 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	C3orf80	F5H4A9	247 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	HSD17B6	O14756	317 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	GEMIN2	O14893	280 aa	Known RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	FCN3	O75636	299 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	DXO	O77932	396 aa	Known RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	EIF4E	P06730	217 aa	Known RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TRGC1	P0CF51	173 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	FCGR2A	P12318	317 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	CCKAR	P32238	428 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	DVL1P1	P54792	670 aa	Predicted RBP	5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	CTBP1	Q13363	440 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	CRMP1	Q14194	572 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	OR7A5	Q15622	319 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	TCTEX1D4	Q5JR98	221 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	SOHLH1	Q5JUK2	328 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	SYPL2	Q5VXT5	272 aa		5.5	□□□□□ -1.53
NECAP1-222	ENST00000640072	ZNF626	Q68DY1	528 aa		5.5	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms