RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 OR4K5Q8NGD3 323 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 OR5AR1Q8NGP9 310 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 OR51F2Q8NH61 342 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 CIRBP-AS1Q8TBR5 109 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 GPX8Q8TED1 209 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 RTN4IP1Q8WWV3 396 aaPredicted RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 PEX13Q92968 403 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 TCEAL3Q969E4 200 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 FLYWCH2Q96CP2 140 aaKnown RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 C9orf72Q96LT7 481 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 MRM3Q9HC36 420 aaKnown RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 DDX18Q9NVP1 670 aaKnown RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 SLC39A1Q9NY26 324 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 PEF1Q9UBV8 284 aaKnown RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF230Q9UIE0 474 aaPredicted RBP2□□□□□ -2.09
CCDC7-216ENST00000640058 HYOU1Q9Y4L1 999 aa2□□□□□ -2.09
CCDC7-216ENST00000640058 IGHV1-69DA0A0B4J2H0 117 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 VGLL3A8MV65 326 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 KRBOX1C9JBD0 128 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 PLPP1O14494 284 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 AKR7A2O43488 359 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 NMT2O60551 498 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 SLC22A5O76082 557 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 HLA-DQA1P01909 254 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 C1GALT1C1LP0DN25 315 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 CD82P27701 267 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 OPRK1P41145 380 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 RBM34P42696 430 aaKnown RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 SLC1A2P43004 574 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 CXCL12P48061 93 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 CDKN2DP55273 166 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 CRADDP78560 199 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 CDK5Q00535 292 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 ART3Q13508 389 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 RNASE13Q5GAN3 156 aaKnown RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 H3F3CQ6NXT2 135 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 C12orf54Q6X4T0 127 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 OTUD6AQ7L8S5 288 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 NKAIN4Q8IVV8 208 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 WDFY1Q8IWB7 410 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 OR10G6Q8NH81 332 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 ZCCHC13Q8WW36 166 aaKnown RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 ISG20Q96AZ6 181 aaKnown RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 SGTBQ96EQ0 304 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 HSD17B10Q99714 261 aaKnown RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 CALN1Q9BXU9 219 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 IQCGQ9H095 443 aaKnown RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 PIGUQ9H490 435 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF442Q9H7R0 627 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 CRLF2Q9HC73 371 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 CD209Q9NNX6 404 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 FBXO6Q9NRD1 293 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 MRPL22Q9NWU5 206 aaKnown RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF391Q9UJN7 358 aa1.99□□□□□ -2.09
CCDC7-216ENST00000640058 YARS2Q9Y2Z4 477 aaKnown RBP1.99□□□□□ -2.09
CCDC7-216ENST00000640058 SHANK1Q9Y566 2161 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 TRAV6A0A075B6T7 132 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 IGHV3-72A0A0B4J1Y9 119 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 IGKV2-24A0A0C4DH68 120 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF99A8MXY4 864 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-216ENST00000640058 ANKRD65E5RJM6 399 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 SIVA1O15304 175 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 GLAP06280 429 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 P0C880 135 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 GABRG2P18507 467 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 CD70P32970 193 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 PPICP45877 212 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 SERPINB8P50452 374 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 DAOAP59103 153 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 RAB11AP62491 216 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 RPL23P62829 140 aaKnown RBP1.98□□□□□ -2.09
CCDC7-216ENST00000640058 ZNF616Q08AN1 781 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 DGCR6Q14129 220 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 RAB11BQ15907 218 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 KLHL40Q2TBA0 621 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 PLCXD3Q63HM9 321 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 ADNP2Q6IQ32 1131 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 LINC00336Q6ZUF6 198 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 SNX20Q7Z614 316 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 VKORC1L1Q8N0U8 176 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 LINC01560Q8TB33 94 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 NAT6Q93015 286 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 GPR21Q99679 349 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 SLIRPQ9GZT3 109 aaKnown RBP1.98□□□□□ -2.09
CCDC7-216ENST00000640058 FGF23Q9GZV9 251 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-216ENST00000640058 DEFB129Q9H1M3 183 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 C1orf198Q9H425 327 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 C8orf33Q9H7E9 229 aaPredicted RBP1.98□□□□□ -2.09
CCDC7-216ENST00000640058 TMEM27Q9HBJ8 222 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 PRSS16Q9NQE7 514 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 C8orf17Q9NRJ1 99 aa1.98□□□□□ -2.09
CCDC7-216ENST00000640058 ADGRA3Q8IWK6 1321 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 BRCA1P38398 1863 aaKnown RBP1.97□□□□□ -2.09
CCDC7-216ENST00000640058 IGHV7-4-1A0A0J9YVY3 117 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 TMEM120BA0PK00 339 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 SYCE1LA8MT33 242 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 C16orf90A8MZG2 172 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 TNFRSF11BO00300 401 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 TAAR5O14804 337 aa1.97□□□□□ -2.09
CCDC7-216ENST00000640058 XRCC2O43543 280 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms