RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CFHR2P36980 270 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 PRKXP51817 358 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 OR8B8Q15620 311 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 SPATS1Q496A3 300 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 Q6YL49 198 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 RASSF6Q6ZTQ3 369 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 SPATC1Q76KD6 591 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 CPLX4Q7Z7G2 160 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 LNX2Q8N448 690 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 KCNJ15Q99712 375 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 PCGF1Q9BSM1 259 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 COPS4Q9BT78 406 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 TRIM36Q9NQ86 728 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 ARL8BQ9NVJ2 186 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 C1orf123Q9NWV4 160 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 TAGLN3Q9UI15 199 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 COMMD3-BMI1R4GMX3 469 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 TRAV38-1A0A0B4J264 116 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 OOEPA6NGQ2 149 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 P2RY10O00398 339 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 ZNF593O00488 134 aaPredicted RBP15.31■□□□□ 0.04
CLN6-220ENST00000637450 ADAM20O43506 726 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 LHBP01229 141 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 SFTPBP07988 381 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 OMGP23515 440 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 FMO3P31513 532 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 ENTPD1P49961 510 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 TEX30Q5JUR7 227 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 C16orf89Q6UX73 402 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 TREML4Q6UXN2 200 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 DEFB107AQ8IZN7 70 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 ZNF511Q8NB15 262 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 OR9Q1Q8NGQ5 310 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 SPSB4Q96A44 273 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 SLAMF6Q96DU3 332 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 TBX15Q96SF7 602 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 NMNAT2Q9BZQ4 307 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 OPA3Q9H6K4 179 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 CENPMQ9NSP4 180 aa15.31■□□□□ 0.04
CLN6-220ENST00000637450 CENPVL3A0A0U1RRI6 287 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 FAM181BA6NEQ2 426 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 TOX4O94842 621 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 CCNB2O95067 398 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 GRPP07492 148 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 SPARCP09486 303 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 SLC2A1P11166 492 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 MAGEA2P43356 314 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 MZT1Q08AG7 82 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 TAF13Q15543 124 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 RUSC1-AS1Q66K80 236 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 ZNF826PQ6ZT77 177 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 GCSAMQ8N6F7 178 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 OR56B2PQ8NGI1 322 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 FAM71F1Q96KD3 344 aaPredicted RBP15.3■□□□□ 0.04
CLN6-220ENST00000637450 WDFY2Q96P53 400 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 TSSK6Q9BXA6 273 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 RASSF4Q9H2L5 321 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 SMURF1Q9HCE7 757 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 TBC1D23Q9NUY8 699 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 NDE1Q9NXR1 346 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 KIF17Q9P2E2 1029 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 N6AMT1Q9Y5N5 214 aa15.3■□□□□ 0.04
CLN6-220ENST00000637450 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.29■□□□□ 0.04
CLN6-220ENST00000637450 A0A1B0GUS0 222 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 XRCC2O43543 280 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 FCN3O75636 299 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 GYPAP02724 150 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 GYPBP06028 91 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 SPI1P17947 270 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 DDOSTP39656 456 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 SLC25A1P53007 311 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 CRMP1Q14194 572 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 C11orf91Q3C1V1 193 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 TEX36Q5VZQ5 186 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 CYP2R1Q6VVX0 501 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 FAM90A1Q86YD7 464 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 TMEM86BQ8N661 226 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 PNLDC1Q8NA58 520 aaKnown RBP15.29■□□□□ 0.04
CLN6-220ENST00000637450 MARCH7Q9H992 704 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 TNFRSF19Q9NS68 423 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 C14orf119Q9NWQ9 140 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 ACTR3BQ9P1U1 418 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 KAAG1Q9UBP8 84 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 BAIAP2Q9UQB8 552 aa15.29■□□□□ 0.04
CLN6-220ENST00000637450 DHRS12A0PJE2 317 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 A6NLC8 198 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 ZNF878C9JN71 531 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 ATP8B1O43520 1251 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 MELTFP08582 738 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 ATP6V1B2P21281 511 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 PPP1R8Q12972 351 aaKnown RBP15.28■□□□□ 0.04
CLN6-220ENST00000637450 METTL11BQ5VVY1 283 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 FIP1L1Q6UN15 594 aaKnown RBP15.28■□□□□ 0.04
CLN6-220ENST00000637450 C11orf53Q8IXP5 236 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 AQP11Q8NBQ7 271 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 OR4Q3Q8NH05 313 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 GATAD2BQ8WXI9 593 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 SGK3Q96BR1 496 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
CLN6-220ENST00000637450 SIRPDQ9H106 197 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms