RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 COMMD2Q86X83 199 aa7□□□□□ -1.29
PNKP-226ENST00000636840 KRTAP1-3Q8IUG1 177 aa7□□□□□ -1.29
PNKP-226ENST00000636840 EGFL6Q8IUX8 553 aa7□□□□□ -1.29
PNKP-226ENST00000636840 ENTHD1Q8IYW4 607 aa7□□□□□ -1.29
PNKP-226ENST00000636840 C1orf87Q8N0U7 546 aa7□□□□□ -1.29
PNKP-226ENST00000636840 ACBD7Q8N6N7 88 aa7□□□□□ -1.29
PNKP-226ENST00000636840 BHLHE23Q8NDY6 225 aa7□□□□□ -1.29
PNKP-226ENST00000636840 CCL17Q92583 94 aa7□□□□□ -1.29
PNKP-226ENST00000636840 UBE2FQ969M7 185 aa7□□□□□ -1.29
PNKP-226ENST00000636840 ERGIC1Q969X5 290 aa7□□□□□ -1.29
PNKP-226ENST00000636840 SGK3Q96BR1 496 aa7□□□□□ -1.29
PNKP-226ENST00000636840 RNFT2Q96EX2 444 aa7□□□□□ -1.29
PNKP-226ENST00000636840 REEP6Q96HR9 211 aa7□□□□□ -1.29
PNKP-226ENST00000636840 COX4I2Q96KJ9 171 aa7□□□□□ -1.29
PNKP-226ENST00000636840 AMELYQ99218 206 aa7□□□□□ -1.29
PNKP-226ENST00000636840 TBX5Q99593 518 aa7□□□□□ -1.29
PNKP-226ENST00000636840 SLC30A2Q9BRI3 323 aa7□□□□□ -1.29
PNKP-226ENST00000636840 POFUT1Q9H488 388 aa7□□□□□ -1.29
PNKP-226ENST00000636840 MOB1AQ9H8S9 216 aa7□□□□□ -1.29
PNKP-226ENST00000636840 RNPEPL1Q9HAU8 725 aa7□□□□□ -1.29
PNKP-226ENST00000636840 ADGRL4Q9HBW9 690 aa7□□□□□ -1.29
PNKP-226ENST00000636840 ABCB9Q9NP78 766 aa7□□□□□ -1.29
PNKP-226ENST00000636840 C14orf119Q9NWQ9 140 aa7□□□□□ -1.29
PNKP-226ENST00000636840 CHCHD3Q9NX63 227 aaKnown RBP7□□□□□ -1.29
PNKP-226ENST00000636840 MRPL15Q9P015 296 aaKnown RBP7□□□□□ -1.29
PNKP-226ENST00000636840 GTF2A1LQ9UNN4 478 aa7□□□□□ -1.29
PNKP-226ENST00000636840 PPP1R3CQ9UQK1 317 aa7□□□□□ -1.29
PNKP-226ENST00000636840 HSPE1-MOB4S4R3N1 261 aa7□□□□□ -1.29
PNKP-226ENST00000636840 HIVEP1P15822 2718 aa7□□□□□ -1.29
PNKP-226ENST00000636840 ACANP16112 2415 aa7□□□□□ -1.29
PNKP-226ENST00000636840 A0A0U1RQV5 110 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 ZSCAN5BA6NJL1 495 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 LRRC30A6NM36 301 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 LOC110117498-PIK3R3F6TDL0 507 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 LYNX1G3V0Z9 82 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 H0YAE9 185 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 H0YJX3 145 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 PSMD9O00233 223 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 CDC14BO60729 498 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 RPSAP08865 295 aaKnown RBP6.99□□□□□ -1.29
PNKP-226ENST00000636840 LYNX1P0DP58 116 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 PEX2P28328 305 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 CAPGP40121 348 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 GZMKP49863 264 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 CHN2P52757 468 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 PSMA6P60900 246 aaKnown RBP6.99□□□□□ -1.29
PNKP-226ENST00000636840 RAB40BQ12829 278 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 GLYATL3Q5SZD4 288 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 CLEC9AQ6UXN8 241 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 LURAP1LQ8IV03 231 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 C8orf59Q8N0T1 100 aaPredicted RBP6.99□□□□□ -1.29
PNKP-226ENST00000636840 CELF2-AS1Q8N7Q2 184 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 PLPP7Q8NBV4 271 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 CCDC54Q8NEL0 328 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 OR11L1Q8NGX0 322 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 OR8S1Q8NH09 359 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 OR2AE1Q8NHA4 323 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 HPS1Q92902 700 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 SPSB4Q96A44 273 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 OR2V2Q96R30 315 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 INPP5EQ9NRR6 644 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 ZNF275Q9NSD4 429 aaPredicted RBP6.99□□□□□ -1.29
PNKP-226ENST00000636840 EXOGQ9Y2C4 368 aaKnown RBP6.99□□□□□ -1.29
PNKP-226ENST00000636840 MPC1Q9Y5U8 109 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 SNX5Q9Y5X3 404 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 R4GMQ9 66 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 CSMD2Q7Z408 3487 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 AKAP9Q99996 3911 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 CSMD1Q96PZ7 3565 aa6.99□□□□□ -1.29
PNKP-226ENST00000636840 FLNAP21333 2647 aaKnown RBP6.98□□□□□ -1.29
PNKP-226ENST00000636840 CSPG4Q6UVK1 2322 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 A0A1W2PQL4 384 aaPredicted RBP6.98□□□□□ -1.29
PNKP-226ENST00000636840 ANXA2P2A6NMY6 339 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 VWC2LB2RUY7 222 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 E9PQ18 207 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 RPP14O95059 124 aaKnown RBP6.98□□□□□ -1.29
PNKP-226ENST00000636840 DBTP11182 482 aaKnown RBP6.98□□□□□ -1.29
PNKP-226ENST00000636840 PSKH1P11801 424 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 ZNF12P17014 697 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 CA6P23280 308 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 GSK3AP49840 483 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 ACTA2P62736 377 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 ACTG2P63267 376 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 CSNK2BP67870 215 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 FAM3AP98173 230 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 RIPPLY1Q0D2K3 151 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 MRPL28Q13084 256 aaKnown RBP6.98□□□□□ -1.29
PNKP-226ENST00000636840 RIN1Q13671 783 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 BCL2L15Q5TBC7 163 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 ZNF691Q5VV52 312 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 CYB5R2Q6BCY4 276 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 Q6ZR03 302 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 OR56B2PQ8NGI1 322 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 HAVCR2Q8TDQ0 301 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 ITLN1Q8WWA0 313 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 MEGF10Q96KG7 1140 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 SIGLEC11Q96RL6 698 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 MICU1Q9BPX6 476 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 BPESC1Q9GZL8 116 aa6.98□□□□□ -1.29
PNKP-226ENST00000636840 PBOV1Q9GZY1 135 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms