RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 SLC22A24Q8N4F4 322 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.62■□□□□ 0.25
CLN5-216ENST00000636780 RHBDD1Q8TEB9 315 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 FN3KRPQ9HA64 309 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 MRPS28Q9Y2Q9 187 aaKnown RBP16.62■□□□□ 0.25
CLN5-216ENST00000636780 FREM1Q5H8C1 2179 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 EP300Q09472 2414 aaPredicted RBP16.62■□□□□ 0.25
CLN5-216ENST00000636780 MEGF11A6BM72 1044 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 PINLYPA6NC86 204 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 OR2AT4A6NND4 320 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 CRTAPO75718 401 aaPredicted RBP16.62■□□□□ 0.25
CLN5-216ENST00000636780 OR2A4O95047 310 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 ITGB2P05107 769 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 CPN1P15169 458 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 H3F3AP84243 136 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 BAMBIQ13145 260 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 WIPI1Q5MNZ9 446 aaPredicted RBP16.62■□□□□ 0.25
CLN5-216ENST00000636780 SPICQ8N5J4 248 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 ZIC4Q8N9L1 334 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 COQ8AQ8NI60 647 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 C15orf40Q8WUR7 153 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 AQP3Q92482 292 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 PGAM5Q96HS1 289 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 ALKBH3Q96Q83 286 aaPredicted RBP16.62■□□□□ 0.25
CLN5-216ENST00000636780 OR2A7Q96R45 310 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 UTP23Q9BRU9 249 aaKnown RBP16.62■□□□□ 0.25
CLN5-216ENST00000636780 ARL6Q9H0F7 186 aa16.62■□□□□ 0.25
CLN5-216ENST00000636780 ELL3Q9HB65 397 aaPredicted RBP16.62■□□□□ 0.25
CLN5-216ENST00000636780 NPIPA2E9PIF3 369 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 NPIPA3F8WFD2 350 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 NAT2P11245 290 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 SUCLG1P53597 346 aaKnown RBP16.61■□□□□ 0.25
CLN5-216ENST00000636780 TMEM50BP56557 158 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 ACTBP60709 375 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 ACTG1P63261 375 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 DHRS2Q13268 280 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 SNAI3Q3KNW1 292 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 LY6G6FQ5SQ64 297 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 SPINK14Q6IE38 97 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 GTPBP8Q8N3Z3 284 aaPredicted RBP16.61■□□□□ 0.25
CLN5-216ENST00000636780 FAM109AQ8N4B1 249 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 FBXO17Q96EF6 278 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 RADILQ96JH8 1075 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 ZNF700Q9H0M5 742 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 CST11Q9H112 138 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 DEPPQ9NTK1 212 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 PISDQ9UG56 409 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 ZNF407Q9C0G0 2248 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 SNRPGP15A8MWD9 76 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 F5H5P2 479 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 GIPP09681 153 aaPredicted RBP16.61■□□□□ 0.25
CLN5-216ENST00000636780 CFPP27918 469 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 DLX5P56178 289 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 SCAND1P57086 179 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 SLC35A1P78382 337 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 ENDOGQ14249 297 aaKnown RBP16.61■□□□□ 0.25
CLN5-216ENST00000636780 HIST3H3Q16695 136 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 OPN5Q6U736 354 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 ST8SIA4Q92187 359 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 CCDC120Q96HB5 630 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 HES7Q9BYE0 225 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 LPAR5Q9H1C0 372 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 ARRDC1-AS1Q9H2J1 176 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 RAB22AQ9UL26 194 aa16.61■□□□□ 0.25
CLN5-216ENST00000636780 OR14I1A6ND48 311 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 I3L521 148 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 SDCBPO00560 298 aaPredicted RBP16.6■□□□□ 0.25
CLN5-216ENST00000636780 ONECUT2O95948 504 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 HLA-AP01891 365 aaKnown RBP16.6■□□□□ 0.25
CLN5-216ENST00000636780 PPP3CBP16298 524 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 FOLR3P41439 243 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 TOR2AQ5JU69 321 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 C9orf135Q5VTT2 229 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 KCTD9Q7L273 389 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 TMEM229BQ8NBD8 167 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 ZNF845Q96IR2 970 aaPredicted RBP16.6■□□□□ 0.25
CLN5-216ENST00000636780 ARHGAP5-AS1Q96IT6 56 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 CXorf58Q96LI9 332 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 C1orf147Q96MC9 270 aaPredicted RBP16.6■□□□□ 0.25
CLN5-216ENST00000636780 ANGPTL4Q9BY76 406 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 WDR54Q9H977 334 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 FANCFQ9NPI8 374 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 PLEKHA6Q9Y2H5 1048 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 HDGFL3Q9Y3E1 203 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 DNAJC13O75165 2243 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 DOCK10Q96BY6 2186 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 LOC105371267A0A1B0GV96 52 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 METTL21EPA6NDL7 271 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 NPIPB13A6NJU9 1138 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 NPIPB4C9JG80 1138 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 VAMP1P23763 118 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 MC2RQ01718 297 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 PPP1R1AQ13522 171 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 UBE2V2Q15819 145 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 BRICD5Q6PL45 260 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 STEAP2Q8NFT2 490 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 OR9K2Q8NGE7 335 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 OR14L1PQ8NHC6 308 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 PLEK2Q9NYT0 353 aa16.6■□□□□ 0.25
CLN5-216ENST00000636780 FBXO9Q9UK97 447 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms