RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 OXA1LQ15070 435 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 RNASEKQ6P5S7 137 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 TMEM99Q8N816 258 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 NDRG4Q9ULP0 352 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 FAHP16930 419 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 HOXC13P31276 330 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 MLLT11Q13015 90 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF266Q14584 549 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 CEACAM16Q2WEN9 425 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 G3V3Q6 166 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 PRAF2O60831 178 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 CRYABP02511 175 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 KIAA1024LP59773 190 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 TNFAIP6P98066 277 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF85Q03923 595 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 ELAVL1Q15717 326 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 SVBPQ8N300 66 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 LRP3O75074 770 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 DGAT2L7PQ6IED9 249 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 SLCO4C1Q6ZQN7 724 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 CELF2-AS1Q8N7Q2 184 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 NUDCD2Q8WVJ2 157 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 XKRY2A2RUG3 117 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 IGFBP6P24592 240 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 C1orf210Q8IVY1 113 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 USF1P22415 310 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 IL22RA2Q969J5 263 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 AKIRIN1Q9H9L7 192 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 PLEKHB1Q9UF11 243 aaPredicted RBP16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 ST3GAL6Q9Y274 331 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 DSCR3O14972 297 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 H2AFB1P0C5Y9 115 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 RAB1AP62820 205 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 CYHR1Q6ZMK1 362 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 OR13D1Q8NGV5 346 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 RCL1Q9Y2P8 373 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 NEURL1O76050 574 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 OR5H8P0DN80 308 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 TEAD1P28347 426 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 TAS2R60P59551 318 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 IHHQ14623 411 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 XKR7Q5GH72 579 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 ABHD17CQ6PCB6 329 aa16.13■□□□□ 0.17
CACNA1A-227ENST00000636549 TAS2R45P59539 299 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 PLA2G2FQ9BZM2 168 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 PBOV1Q9GZY1 135 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 STRAPQ9Y3F4 350 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 CASP3P42574 277 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 C19orf35Q6ZS72 473 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 UBE3DQ7Z6J8 389 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 TAAR6Q96RI8 345 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 TREX1Q9NSU2 369 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 PSG11Q9UQ72 335 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 MICBQ29980 383 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 TMEM147Q9BVK8 224 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 INPP5EQ9NRR6 644 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 SAGE1Q9NXZ1 904 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 FAM181BA6NEQ2 426 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF207O43670 478 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 AQP8O94778 261 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 DUS4LO95620 317 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 MT-CO3P00414 261 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 HRH1P35367 487 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 FAM219BQ5XKK7 198 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 OR4C3Q8NH37 302 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 SIAEQ9HAT2 523 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 GAR1Q9NY12 217 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 PTTG1O95997 202 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 IL5P05113 134 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 CD14P08571 375 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 ACOT6Q3I5F7 207 aaPredicted RBP16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 TIPARPQ7Z3E1 657 aaKnown RBP16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 PKMYT1Q99640 499 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 FLVCR2Q9UPI3 526 aa16.12■□□□□ 0.17
CACNA1A-227ENST00000636549 AGBL4Q5VU57 503 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 RNF113BQ8IZP6 322 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 OR6K3Q8NGY3 331 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 POM121L2Q96KW2 1035 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 VAMP3Q15836 100 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 B3GNTL1Q67FW5 361 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 PIK3IP1Q96FE7 263 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 GSG1Q2KHT4 349 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 MUC15Q8N387 334 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 BIRC8Q96P09 236 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 USP3Q9Y6I4 520 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 A0A1W2PR48 441 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 K7ESF4 209 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 ZBTB25P24278 435 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF77Q15935 545 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 ZNF528Q3MIS6 628 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 ADAM5Q6NVV9 412 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 CA13Q8N1Q1 262 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 FLYWCH2Q96CP2 140 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 RTN4RQ9BZR6 473 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 ADGRL4Q9HBW9 690 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 A0A1W2PNV4 684 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 PIGPP57054 158 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 RPL18Q07020 188 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 RFPL4BQ6ZWI9 263 aa16.11■□□□□ 0.17
CACNA1A-227ENST00000636549 SLC25A32Q9H2D1 315 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms