RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 SLC18B1Q6NT16 456 aa16.49■□□□□ 0.23
TARDBP-228ENST00000629725 TSEN54Q7Z6J9 526 aaKnown RBP16.49■□□□□ 0.23
TARDBP-228ENST00000629725 PPP1R35Q8TAP8 253 aa16.49■□□□□ 0.23
TARDBP-228ENST00000629725 MRPL15Q9P015 296 aaKnown RBP16.49■□□□□ 0.23
TARDBP-228ENST00000629725 A0A1B0GW55 424 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 GGT3PA6NGU5 568 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 FAM220BPB1ANY3 271 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 NPPAP01160 153 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DUX4L2P0CJ85 424 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DUX4L3P0CJ86 424 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DUX4L4P0CJ87 422 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DUX4L5P0CJ88 424 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DUX4L6P0CJ89 424 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DUX4L7P0CJ90 424 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 SAA4P35542 130 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 KIR2DS4P43632 304 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 RPS6KA3P51812 740 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DLX1P56177 255 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 TPTEP56180 551 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 ZNF92Q03936 586 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 MZT1Q08AG7 82 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 MICBQ29980 383 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DUX4L9Q6RFH8 374 aaPredicted RBP16.48■□□□□ 0.23
TARDBP-228ENST00000629725 KLHDC1Q8N7A1 406 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 OR2AJ1Q8NGZ0 328 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 ITPKCQ96DU7 683 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 CCL13Q99616 98 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 SRA1Q9HD15 236 aaKnown RBP16.48■□□□□ 0.23
TARDBP-228ENST00000629725 DUX4Q9UBX2 424 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 B9D1Q9UPM9 204 aa16.48■□□□□ 0.23
TARDBP-228ENST00000629725 IGLV1-36A0A0B4J1U3 117 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 HMGB1P1B2RPK0 211 aaPredicted RBP16.47■□□□□ 0.23
TARDBP-228ENST00000629725 H3BUX3 64 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 MUC1P15941 1255 aaPredicted RBP16.47■□□□□ 0.23
TARDBP-228ENST00000629725 KLRD1Q13241 179 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 DPY19L2P2Q6ZN68 376 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 SLC36A1Q7Z2H8 476 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 Q8N7P7 452 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 SLC26A10Q8NG04 563 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 OR2T12Q8NG77 320 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 OR4C13Q8NGP0 309 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 OR2T6Q8NHC8 308 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 PNRC2Q9NPJ4 139 aaKnown RBP16.47■□□□□ 0.23
TARDBP-228ENST00000629725 C14orf119Q9NWQ9 140 aa16.47■□□□□ 0.23
TARDBP-228ENST00000629725 TENM3Q9P273 2699 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 A0A0G2JND7 137 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.46■□□□□ 0.23
TARDBP-228ENST00000629725 M0R135 149 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 BHLHE40O14503 412 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 TXNDC12O95881 172 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 PCK2Q16822 640 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 SNAI3Q3KNW1 292 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 WDR38Q5JTN6 314 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 OR6V1Q8N148 313 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 PNKDQ8N490 385 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 BEND2Q8NDZ0 799 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 OR4S1Q8NGB4 309 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 OR2AE1Q8NHA4 323 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 SLC7A13Q8TCU3 470 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 ZNF799Q96GE5 643 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 CYB5R1Q9UHQ9 305 aa16.46■□□□□ 0.23
TARDBP-228ENST00000629725 PRPF19Q9UMS4 504 aaKnown RBP16.46■□□□□ 0.23
TARDBP-228ENST00000629725 NDUFB3O43676 98 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 EDF1O60869 148 aaKnown RBP16.45■□□□□ 0.22
TARDBP-228ENST00000629725 UBE2E1P51965 193 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 FXYD6P3P58550 94 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 ELF3P78545 371 aaPredicted RBP16.45■□□□□ 0.22
TARDBP-228ENST00000629725 ACSM1Q08AH1 577 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 RFX4Q33E94 735 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 SLC36A3Q495N2 470 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 COQ5Q5HYK3 327 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 LYG1Q8N1E2 194 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 LNX2Q8N448 690 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 FAM216BQ8N7L0 139 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 TNFRSF14Q92956 283 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 SPTSSAQ969W0 71 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 PHF21AQ96BD5 680 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 SSX3Q99909 188 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 DCTN5Q9BTE1 182 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 FAM234AQ9H0X4 552 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 ANKRD19PQ9H560 264 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 MAB21L2Q9Y586 359 aa16.45■□□□□ 0.22
TARDBP-228ENST00000629725 MRASO14807 208 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 ZNF682O95780 498 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 VSIG10L2P0DP72 767 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 GRK5P34947 590 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 IKZF1Q13422 519 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 LY6EQ16553 131 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 NSUN5P1Q3KNT7 163 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 IFI44LQ53G44 452 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 METTL21CQ5VZV1 264 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 LRRC29Q8WV35 223 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 RSRC1Q96IZ7 334 aaKnown RBP16.44■□□□□ 0.22
TARDBP-228ENST00000629725 CLPTM1LQ96KA5 538 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 ERMAPQ96PL5 475 aaPredicted RBP16.44■□□□□ 0.22
TARDBP-228ENST00000629725 NMNAT3Q96T66 252 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 SIKE1Q9BRV8 207 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 TMEM120AQ9BXJ8 343 aa16.44■□□□□ 0.22
TARDBP-228ENST00000629725 RANBP3Q9H6Z4 567 aaPredicted RBP16.44■□□□□ 0.22
TARDBP-228ENST00000629725 RNPEPL1Q9HAU8 725 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms