RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 SCGB2A2Q13296 93 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 EIF2B1Q14232 305 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 TEX30Q5JUR7 227 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 ZNF362Q5T0B9 420 aaPredicted RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 C1orf146Q5VVC0 180 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 FAHD2BQ6P2I3 314 aaPredicted RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 SHQ1Q6PI26 577 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 DRAM2Q6UX65 266 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 IL17RELQ6ZVW7 336 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 PGAP1Q75T13 922 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 ZNF771Q7L3S4 317 aaPredicted RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 SHFQ7M4L6 423 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 PRIMA1Q86XR5 153 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 ERI1Q8IV48 349 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 KLHL36Q8N4N3 616 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 SPICQ8N5J4 248 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 TEX29Q8N6K0 151 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 IQCF1Q8N6M8 205 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 ZNF283Q8N7M2 679 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 BHLHE23Q8NDY6 225 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 OR6N2Q8NGY6 317 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 ITLN1Q8WWA0 313 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 DNAJC9Q8WXX5 260 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 TMEM186Q96B77 213 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 SLAMF6Q96DU3 332 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 ZNF799Q96GE5 643 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 FAHD2AQ96GK7 314 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 C1orf159Q96HA4 380 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 OR2V2Q96R30 315 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 INTS14Q96SY0 518 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 DDOQ99489 341 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 KCNJ15Q99712 375 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 SOX7Q9BT81 388 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 C1QTNF5Q9BXJ0 243 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 CADM1Q9BY67 442 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 PRRG3Q9BZD7 231 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 NMNAT2Q9BZQ4 307 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 OR51V1Q9H2C8 321 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 WDR76Q9H967 626 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 TMEM106BQ9NUM4 274 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 HIF1ANQ9NWT6 349 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 MRPL22Q9NWU5 206 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 UBAP1Q9NZ09 502 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 FBLN5Q9UBX5 448 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 PPP1R3CQ9UQK1 317 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 NOP16Q9Y3C1 178 aaKnown RBP5.41□□□□□ -1.54
TCF4-249ENST00000625716 WIPI2Q9Y4P8 454 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 NPTNQ9Y639 398 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 CACNG2Q9Y698 323 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 COMMD3-BMI1R4GMX3 469 aa5.41□□□□□ -1.54
TCF4-249ENST00000625716 ARFGEF3Q5TH69 2177 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 VPS13CQ709C8 3753 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 CR1P17927 2039 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 SETD2Q9BYW2 2564 aaPredicted RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 TRAV20A0A0B4J274 112 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 FAM183AA6NL82 134 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 IQCF6A8MYZ5 107 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 FAM157AC9JC47 383 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 ZNF878C9JN71 531 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 G3V2T6 193 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 WNT9BO14905 357 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 TBX1O43435 398 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 TIPRLO75663 272 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 GLCEO94923 617 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 ANXA2P07355 339 aaKnown RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 H2BFMP0C1H6 154 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 CLUP10909 449 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 FCGR1AP12314 374 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 FASP25445 335 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 PRKXP51817 358 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 LMO4P61968 165 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 MZT1Q08AG7 82 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 GK2Q14410 553 aaPredicted RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 OR8G1Q15617 311 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 SNAPC1Q16533 368 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 KRTAP27-1Q3LI81 207 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 KLHL12Q53G59 568 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 TMEM255AQ5JRV8 349 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 PLBD1Q6P4A8 553 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 Q6ZR03 302 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 COLCA1Q6ZS62 124 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 SPATC1Q76KD6 591 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 DPY19L4Q7Z388 723 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 TMEM179BQ7Z7N9 219 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 NAA40Q86UY6 237 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 C1orf87Q8N0U7 546 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 MUC20Q8N307 709 aaPredicted RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 PAPD5Q8NDF8 572 aaKnown RBP5.4□□□□□ -1.54
TCF4-249ENST00000625716 OR10AD1Q8NGE0 317 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 OR11L1Q8NGX0 322 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 OR5K1Q8NHB7 308 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 THEM6Q8WUY1 208 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 ZNRF4Q8WWF5 429 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 TMEM158Q8WZ71 300 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 NRBF2Q96F24 287 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 SLC22A4Q9H015 551 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 TOR3AQ9H497 397 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 OPA3Q9H6K4 179 aa5.4□□□□□ -1.54
TCF4-249ENST00000625716 MED20Q9H944 212 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms