RNA–Protein interactions for RNA: ENST00000623253.4_PAR_Y

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253_PAR_Y TXNDC12O95881 172 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y RENP00797 406 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y TPTEP56180 551 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y FXYD6P3P58550 94 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SLC36A3Q495N2 470 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SLC18B1Q6NT16 456 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SMARCD3Q6STE5 483 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y GDPGP1Q6ZNW5 385 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CPLX4Q7Z7G2 160 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y LNX2Q8N448 690 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SLC26A10Q8NG04 563 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ST8SIA4Q92187 359 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y FUZQ9BT04 418 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SLC22A4Q9H015 551 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y TRIM36Q9NQ86 728 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y MAGEL2Q9UJ55 1249 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CMYA5Q8N3K9 4069 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y DOCK11Q5JSL3 2073 aa13.38□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y DVL1O14640 695 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y OR10H3O60404 316 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y GMDSO60547 372 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y HSD17B1P14061 328 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SPIBQ01892 262 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y KRTAP27-1Q3LI81 207 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SAMD4BQ5PRF9 694 aaKnown RBP13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y DHRS7BQ6IAN0 325 aaPredicted RBP13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y Q6ZSV7 163 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ZNF826PQ6ZT77 177 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ZSCAN4Q8NAM6 433 aaPredicted RBP13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y OR4K13Q8NH42 304 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y MCUR1Q96AQ8 359 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y PYURFQ96I23 114 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y RPRD1BQ9NQG5 326 aaKnown RBP13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y N6AMT1Q9Y5N5 214 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y V9GYQ6 96 aa13.37□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y IGHV3OR15-7A0A075B7D8 119 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y BTBD17A6NE02 478 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y GADD45GO95257 159 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SEMG1P04279 462 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y C2orf68Q2NKX9 166 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y VMO1Q7Z5L0 202 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y LDLRAD3Q86YD5 345 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y PGAM4Q8N0Y7 254 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y OR2AE1Q8NHA4 323 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y FANK1Q8TC84 345 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y LRTOMTQ8WZ04 291 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SPTSSAQ969W0 71 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y NSMCE2Q96MF7 247 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SEMA6AQ9H2E6 1030 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y FN3KQ9H479 309 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CNTD2Q9H8S5 307 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ONECUT1Q9UBC0 465 aa13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y PRKDCP78527 4128 aaKnown RBP13.36□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y WNK1Q9H4A3 2382 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y M0R135 149 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ECDO95905 644 aaPredicted RBP13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CSF1P09603 554 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y HIST1H1CP16403 213 aaKnown RBP13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y NOS3P29474 1203 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SLC6A6P31641 620 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y IFNGR2P38484 337 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ZNF92Q03936 586 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y RFX4Q33E94 735 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SNAI3Q3KNW1 292 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CDONQ4KMG0 1287 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y FAM90A1Q86YD7 464 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y PLPP7Q8NBV4 271 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ZNF799Q96GE5 643 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y IFT27Q9BW83 186 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y PNRC2Q9NPJ4 139 aaKnown RBP13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y DNAJB11Q9UBS4 358 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CD300AQ9UGN4 299 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CYB5R1Q9UHQ9 305 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y TAGLN3Q9UI15 199 aa13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y RPUSD1Q9UJJ7 312 aaKnown RBP13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CAB39Q9Y376 341 aaPredicted RBP13.35□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ZNF816-ZNF321PA0A0X1KG74 233 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y A0A1B0GVI7 797 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y A0A1W2PRD5 423 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y A0A1W2PRF3 423 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y A0A1W2PRM7 423 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ARPC2O15144 300 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ARPC3O15145 178 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y PTBP3O95758 552 aaKnown RBP13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y FABP3P05413 133 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y ZNF823P16415 610 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y PRB3Q04118 309 aaPredicted RBP13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y EGR3Q06889 387 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y GLYATL3Q5SZD4 288 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y FGFRL1Q8N441 504 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y GCSAMQ8N6F7 178 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y SPERTQ8NA61 448 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y MAP6Q96JE9 813 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CDRT15Q96T59 188 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y CCL13Q99616 98 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y OR52D1Q9H346 318 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y C16orf95Q9H693 158 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y NDE1Q9NXR1 346 aa13.34□□□□□ -0.27
CD99-211ENST00000623253_PAR_Y OR6C68A6NDL8 312 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms