RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 STEAP2Q8NFT2 490 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 OR14K1Q8NGZ2 314 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 NUDCD2Q8WVJ2 157 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 C17orf50Q8WW18 174 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 NKD1Q969G9 470 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 SOX7Q9BT81 388 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 REG4Q9BYZ8 158 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 FXYD6Q9H0Q3 95 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 PLEKHA6Q9Y2H5 1048 aa8.32□□□□□ -1.08
PDPN-212ENST00000621990 MRPS28Q9Y2Q9 187 aaKnown RBP8.32□□□□□ -1.08
PDPN-212ENST00000621990 C19orf67A6NJJ6 358 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CEACAM18A8MTB9 384 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CDC14BO60729 498 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 HLA-AP01891 365 aaKnown RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 KLK3P07288 261 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 UBBP0CG47 229 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CCL3P10147 92 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 OTX1P32242 354 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 SUCLG1P53597 346 aaKnown RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 SORDQ00796 357 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 FAM189A2Q15884 450 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 HYAL4Q2M3T9 481 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 SCGB2B2Q4G0G5 96 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 SLC22A6Q4U2R8 563 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 SIGIRRQ6IA17 410 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 RGS7BPQ6MZT1 257 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 CRIP3Q6Q6R5 217 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 LYG2Q86SG7 212 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 OR2Y1Q8NGV0 311 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 KCNG3Q8TAE7 436 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 MITD1Q8WV92 249 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 PCNPQ8WW12 178 aaKnown RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 NABP1Q96AH0 204 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 ZNF416Q9BWM5 594 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 ARL6Q9H0F7 186 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 NELFAQ9H3P2 528 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 NUP50Q9UKX7 468 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 TRIOBPQ9H2D6 2365 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 IGKV1-9A0A0C4DH69 117 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 A0A0U1RQV5 110 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 MFSD2BA6NFX1 497 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 SLC2A1P11166 492 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 SLC25A4P12235 298 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 PRF1P14222 555 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 POU3F2P20265 443 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 MSR1P21757 451 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CD34P28906 385 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 AGTR1P30556 359 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 HRH1P35367 487 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 SSR4P51571 173 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 PRKXP51817 358 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CLDN17P56750 224 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 ENDOGQ14249 297 aaKnown RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 ZNF345Q14585 488 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 PLAC9Q5JTB6 97 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 OR52W1Q6IF63 320 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 GLIPR1L1Q6UWM5 242 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CD163Q86VB7 1156 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CHST4Q8NCG5 386 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 TMEM104Q8NE00 496 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 DHRS9Q9BPW9 319 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 NICN1Q9BSH3 213 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 SELENOIQ9C0D9 397 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CST11Q9H112 138 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 FN3KRPQ9HA64 309 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.31□□□□□ -1.08
PDPN-212ENST00000621990 FOXD3Q9UJU5 478 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 FBXO4Q9UKT5 387 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 PTRH2Q9Y3E5 179 aaKnown RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 FLVCR1Q9Y5Y0 555 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 NCOA6Q14686 2063 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 COL27A1Q8IZC6 1860 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 hCG_1807616A0A1W2PRN6 198 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 C9orf170A2RU37 121 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 OR5H14A6NHG9 310 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 OR2AT4A6NND4 320 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 FOXI3A8MTJ6 420 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 E9PLN8 166 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 I3L521 148 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 STK17BO94768 372 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 ZNF250P15622 560 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 HIST1H1DP16402 221 aaKnown RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 CD96P40200 585 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 OR3A4PP47883 348 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 CSNK1A1P48729 337 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 NKPD1Q17RQ9 610 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 PNLIPRP3Q17RR3 467 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 VAX1Q5SQQ9 334 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 PHYHD1Q5SRE7 291 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 ZNF660Q6AZW8 331 aaPredicted RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 C17orf107Q6ZR85 190 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 RTN4RL2Q86UN3 420 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 SLC51BQ86UW2 128 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 NAA40Q86UY6 237 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 HOGA1Q86XE5 327 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 FAM89BQ8N5H3 189 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 RBPMSQ93062 196 aaKnown RBP8.31□□□□□ -1.08
PDPN-212ENST00000621990 LYZL4Q96KX0 146 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 MFFQ9GZY8 342 aa8.31□□□□□ -1.08
PDPN-212ENST00000621990 IFT46Q9NQC8 304 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms